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Name : lpfA (SSON53_22480) Accession : YP_005458986.1 Strain : Shigella sonnei 53G Genome accession: NC_016822 Putative virulence/resistance : Unknown Product : fimbrial protein Function : - COG functional category : - COG ID : - EC number : - Position : 4238578 - 4239150 bp Length : 573 bp Strand : + Note : 'COG3539 P pilus assembly protein, pilin FimA' DNA sequence : ATGAAGCGTAATATTATAGGCGGTGCATTCACTCTGGCATCTCTAATGCTGGCCGGGCATGCACTGGCAGAAGATGGTGT TGTTCACTTCGTCGGTGAAATTGTCGACACTACTTGTGAAGTTACCTCCGATACAGCCGATCAAATTGTCCCACTGGGTA AAGTCAGTAAAAATGCATTTTCAGGTGTAGGTAGTCTGGCGTCGCCACAGAAGTTCAGTATTAAACTTGAAAATTGCCCG GCAACGTACACTCAAGCAGCCGTTCGTTTTGATGGTACAGAAGCGCCTGGCGGCGACGGCGACCTGAAAGTGGGTACGCC GCTTACAGCAGGCAACCCTGGTGATTTTACCGGTACAGGACAAGCGATTGCGGCAACCGGCGTTGGTATTCGTATTTTTA ACCAGTCCGATAATTCGCTGGTTAAACTTTATAACGACTCTGCTTATACCGCTATCGATGCTGAAGGCAAGGCTGAAATG AAGTTTATTGCACGCTATGTGGCAACCAATGCGACCGTAACGGCTGGTACGGCGAACGCTGATTCACAATTTACTGTCGA ATATAAGAAATAA Protein sequence : MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCP ATYTQAAVRFDGTEAPGGDGDLKVGTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSLVKLYNDSAYTAIDAEGKAEM KFIARYVATNATVTAGTANADSQFTVEYKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lpfA | YP_006098367.1 | putative major fimbrial subunit | Not tested | Tn2411 | Protein | 8e-76 | 98 |
