Gene Information

Name : SSON53_22095 (SSON53_22095)
Accession : YP_005458911.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Unknown
Product : IS600 ORF1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4156027 - 4156329 bp
Length : 303 bp
Strand : +
Note : COG2963 Transposase and inactivated derivatives

DNA sequence :
ATGAGCAGAAAAACCCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCCTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCTCTTCCTGAAGACACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA

Protein sequence :
MSRKTQRYSKEFKAEAVRTVPENQLSISEGASRLSLPEDTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKATAYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 1e-38 98
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 1e-38 98
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-38 97
unnamed AAF09021.1 unknown Not tested SHI-O Protein 3e-38 97
unnamed AAF09029.1 unknown Not tested SHI-O Protein 3e-38 97
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 2e-38 97
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 2e-32 96
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 2e-32 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_22095 YP_005458911.1 IS600 ORF1 VFG1707 Protein 7e-39 97