Gene Information

Name : SSON53_21600 (SSON53_21600)
Accession : YP_005458812.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Unknown
Product : IS629 orf
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4057135 - 4057488 bp
Length : 354 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
ATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGCTATGCAGCGAACTGCATATTGCCCCGTCAACGTA
TTACCACTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAGAGA
TACAGCGCGTATACGATGAAAATCACAAGGTATACGGTGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGTATCAGAGTGG
CCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGACCATC
AGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAA

Protein sequence :
MPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVKSGVSCYGKVSEW
PDALWHVSWRLWDLPVFSGVKRSVRPSAGKPLPQATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpD AAD44737.1 TnpD Not tested SHI-2 Protein 8e-52 100
unnamed AAF09024.1 unknown Not tested SHI-O Protein 3e-51 99
c3595 NP_755470.1 transposase Not tested PAI I CFT073 Protein 4e-29 64
r14 AAC61721.1 transposase R14 Not tested PAI I CFT073 Protein 5e-29 64
unnamed AAT48692.1 transposase R14 Not tested PAI I 4787 Protein 3e-29 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_21600 YP_005458812.1 IS629 orf VFG1716 Protein 1e-29 64