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Name : SSON53_21560 (SSON53_21560) Accession : YP_005458804.1 Strain : Shigella sonnei 53G Genome accession: NC_016822 Putative virulence/resistance : Virulence Product : membrane transport protein Function : - COG functional category : - COG ID : - EC number : - Position : 4051045 - 4052238 bp Length : 1194 bp Strand : + Note : COG0477 Permeases of the major facilitator superfamily DNA sequence : ATGTCACCAGGGATCGAAGATACGCCCCAAAAAACACTGTCCTGCTGGCCACTTGCGTTCAGTGCCGGGCTTCTCGGTAT CGGACAGAACGGTCTGCTGGTTGTGCTCCCTGTTCTGGTCATACAGACAAATCTGAGTCTGTCTGTATGGGCTGCCCTGC TGATGCTTGGCTCAATGCTGTTTCTGCCATCGTCCCCGTGGTGGGGAAAGCAAATTTCCCGTACTGGCAGTAAACCTGTG GTGTTGTGGGCTCTGGGAGGATATGGCATAAGCTTTACCCTGCTAGGGCTGGGAAGCGTGCTGATGGCTACCAGCGCCAT AACAACAGCGGTGGGACTGGGAATATTAATCATCGCCCGGATCGCCTACGGGCTGACCGTGTCGGCAATGGTGCCAGCCT GTCAGGTCTGGGCATTGCAGAGAGCTGGAGAAGGGAATCGCATGGCCGCTCTGGCAACCATCAGCTCCGGCCTGAGTTGC GGCAGGCTATTCGGGCCGCTGTGCGCGGCAGCAATGCTGGCCATTCATCCTCTGGCGCCACTGGGGCTACTGATGGCAGC ACCAGTGCTGGCGCTGCTGATGCTGCTGCGGTTGCCCGGCACACCACCACAGCCCACACCGGAGTGCAAGAGCGTCAGTC TGAAGCGGGATTGTCTGCCTTATCTGCTTTGCGCAATATTACTGGCTGCGGCGGTGAGCATGATGCAGCTTGGACTTTCG CCTGCCCTTACTCGCCAGTTCGTCACGGATACCACCGCCATTAGCCAACAGGTGGCCTGGCTGTTGGGTCTGTCCGCAGT AGCTGCGCTTATCGCGCAGTTCGGGGTACTCCGTCCGCAGCGCCTGACTCCGGTGGCCCTGCTCCTGAGTGCCGGAGTGT TGATGAGTGGTGGTCTGGCTATCATGCTCTCCGAACAGCTATGGTTGTTTTACCCGGGCTGTGCAGTGCTGTCATTTGGA GCAGCTCTGGCAACACCCGCTTATCAACTTCTACTGAATGATAAGCTGGCTGATGGCGCAGGCGCGGGCTGGCTCGCTAC CAGTCACACACTTGGCTATGGACTGTGCGCTTTGCTGGTGCCGCTGGTATCGAAAACAGGTGTCGCAATCGCGCTGATTA TGGCAGCATTATTTGCAACTATATTATTTACCATTGTGTCTGTATTTATCTGGCATTACCGTACTATCAAATAA Protein sequence : MSPGIEDTPQKTLSCWPLAFSAGLLGIGQNGLLVVLPVLVIQTNLSLSVWAALLMLGSMLFLPSSPWWGKQISRTGSKPV VLWALGGYGISFTLLGLGSVLMATSAITTAVGLGILIIARIAYGLTVSAMVPACQVWALQRAGEGNRMAALATISSGLSC GRLFGPLCAAAMLAIHPLAPLGLLMAAPVLALLMLLRLPGTPPQPTPECKSVSLKRDCLPYLLCAILLAAAVSMMQLGLS PALTRQFVTDTTAISQQVAWLLGLSAVAALIAQFGVLRPQRLTPVALLLSAGVLMSGGLAIMLSEQLWLFYPGCAVLSFG AALATPAYQLLLNDKLADGAGAGWLATSHTLGYGLCALLVPLVSKTGVAIALIMAALFATILFTIVSVFIWHYRTIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| shiF | AAD44744.1 | ShiF | Virulence | SHI-2 | Protein | 5e-150 | 99 |
| shiF | YP_002414047.1 | putative membrane transport protein, major facilitator superfamily | Not tested | Not named | Protein | 2e-149 | 99 |
| imm | NP_839224.1 | membrane transport protein | Not tested | SHI-2 | Protein | 7e-150 | 99 |
| imm | NP_709453.1 | membrane transport protein | Not tested | SHI-2 | Protein | 7e-150 | 99 |
| unnamed | AAD54670.1 | unknown | Not tested | SHI-2 | Protein | 1e-149 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSON53_21560 | YP_005458804.1 | membrane transport protein | VFG0614 | Protein | 3e-150 | 99 |
