Gene Information

Name : SSON53_19505 (SSON53_19505)
Accession : YP_005458403.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Virulence
Product : N-acetylmannosamine-6-phosphate 2-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.9
Position : 3675219 - 3675908 bp
Length : 690 bp
Strand : -
Note : COG3010 Putative N-acetylmannosamine-6-phosphate epimerase

DNA sequence : 
ATGTCGTTACTTGCACAACTGGATCAAAAAATCGCTGCTAACGGTGGCCTGATTGTCTCCTGCCAGCCGATTCCTGACAG
CCCGCTCGATAAACCCGAAATCGTCGCAGCCATGGCATTAGCGGCAGAGCAGGCGGGCGCGGTTGCCATTCGCATCGAAG
GTGTGGCAAATCTGCAAGCCACGCGTGCGGTGGTGAGCGTGCCGATTATTGGAATTGTGAAACGCGATCTGGAGGATTCT
CCGGTACGCATCACGGCCTATATTGAAGATGTCGATGCGCTGGCGCAGGCGGGCGCGGACATTATCGCCATTGACGGCAC
CGACCGCCCGCGTCCGGTGCCTGTTGAAACGCTGCTGGCACGTATACATCATCACGGTTTACTGGCGATGACCGACTGCT
CAACGCCGGAAGACGGCCTGGCATGCCAAAAGCTGGGCGCCGAAATTATTGGCACTACGCTTTCTGGCTATACCACGCCT
GAAACGCCAGAAGAGCCGGATCTGGCGCTGGTGAAAACGTTGAGCGAAGCCGGATGTCGGGTGATTGCCGAAGGGCGTTA
CAACACGCCTGCTCAGGCGGCAGATGCGATGCGCCACGGCGCGTGGGCGGTGACGGTCGGTTCTGCCATTACGCGTCTTG
AACACATTTGTCAGTGGTACAACACAGCGATGAAAAAGGCGGTGCTATGA

Protein sequence : 
MSLLAQLDQKIAANGGLIVSCQPIPDSPLDKPEIVAAMALAAEQAGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDS
PVRITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTP
ETPEEPDLALVKTLSEAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQWYNTAMKKAVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1378 YP_001217321.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested VPI-2 Protein 8e-38 59
VC1781 NP_231416.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested VPI-2 Protein 7e-38 58
nanE ACA01846.1 N-acetylmannosamine-6-phosphate epimerase Not tested VPI-2 Protein 1e-37 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_19505 YP_005458403.1 N-acetylmannosamine-6-phosphate 2-epimerase VFG1114 Protein 3e-38 58