Gene Information

Name : SSON53_18285 (SSON53_18285)
Accession : YP_005458161.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3434031 - 3434612 bp
Length : 582 bp
Strand : +
Note : -

DNA sequence :
ATGTATTACCCTGTGACAGACTATATCGCTCTTGCTCTCATTATTAGCTTTCTTTTTCTGACATTATTTATCTGCCTGTT
ATGCCTTAAACATGAGCGAATAAAAAAAGAAACTATCAGGCAAAAAAATGCACATATTCTGGAGCATGGCTGGAATGCAA
CTGAGTTCTCATGGTTCCGATACGGACAGTATAACGAAACGGGTATTTACATCTCGATCGAGAAGACCATTATCATTACA
ATCACCGTTTCTGGTGAGTGCTTTAAAAAAGAATACAGCATTGTCTCCCACATGCTGGTCACTGACACCATAACAGAGGC
CACCCTGTACGAAAACGGGCTGTATACGCGCCACATCAGACTCAGTCGCCCAGTATCTGACAGCAAATACCCCTTGCCAC
CCGGATCTCAGCTCATTAAAAATATGACCTTACGACTGCGCCTGCAGGATCAGCAGGAAGAAACATCCGTGACATTATTT
CAGGGAAAAATGAGTACCGACGGAAATAACTATTACATCATCAAAGGTAAAGTAAGCTCAGTACTTCTGTTATTAAAAAT
GCTGCAGATTAATCACGCCTGA

Protein sequence :
MYYPVTDYIALALIISFLFLTLFICLLCLKHERIKKETIRQKNAHILEHGWNATEFSWFRYGQYNETGIYISIEKTIIIT
ITVSGECFKKEYSIVSHMLVTDTITEATLYENGLYTRHIRLSRPVSDSKYPLPPGSQLIKNMTLRLRLQDQQEETSVTLF
QGKMSTDGNNYYIIKGKVSSVLLLLKMLQINHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00460.1 unknown Not tested SHI-1 Protein 2e-59 99
ECUMN_3366 YP_002414039.1 hypothetical protein Not tested Not named Protein 1e-58 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_18285 YP_005458161.1 hypothetical protein VFG1739 Protein 9e-59 98