Gene Information

Name : SSON53_18275 (SSON53_18275)
Accession : YP_005458159.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Virulence
Product : putative plasmid transfer protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3429004 - 3429765 bp
Length : 762 bp
Strand : +
Note : -

DNA sequence :
ATGGTTAAATCACACGGCACCGTCAGTGTCGACGGTAAAGTCTCTGATGCTGACCTCACTTACCTGGAAGAGGTGGCAAA
CAGCACCGGGCAGGAGGTGGACAAAAGCCGCCTGACATCACAGGCCTTTGCCCGCGCGGCACTGATCACTGATGTGGGTA
TTGCTCTGGCTACGGAACTGGAAACGGCCGGGCAGAAATGGTCTCTGGGCTTCCCCCCCAAATTCCAGCGCGTCGACCTG
TTCAACTACAACGTGCTGGTCAGAAATTATGACAGCAGCGCCTTCAAAGGCGACCGCTACCACAACACGAAAAATGGCAT
CAACGCCGACATCGGTGCCAGTACGGACCTGGATGACAACTGGACGCTGGGACTGGTCGCACAGAACCTGATCCCCCGTA
GTATTGAGACAAAAGAAGTGAACGGTATCACGGAAACCTTCAGGATCCGCCCGCAGGTGACGGCCGGTGTCTCCTGGCAC
AACGCGATGTTCACCACCGCATTTGATGTGGATCTGACCCCGGCCAGCGGTTTCACCTCCGACAGCAACCGTCAGTTTGC
CGCCATTGGCGCAGAATTTAATGCCTGGAAATGGGCACAGCTGCGCGCCGGTTACCGTCAGAATCTGGCCGGTAACGACG
GCAGTGCATTCACGGCCGGGGTGGGGATCTCACCGTTTGATGTGGTTCACCTTGATGTTGCAGGCCTGATCGGCACGGAC
AACACTTACGGTGCGGTCGCACAGTTCCAGTTCACCTTCTGA

Protein sequence :
MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQAFARAALITDVGIALATELETAGQKWSLGFPPKFQRVDL
FNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLIPRSIETKEVNGITETFRIRPQVTAGVSWH
NAMFTTAFDVDLTPASGFTSDSNRQFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
NTYGAVAQFQFTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4823 NP_838461.1 hypothetical protein Not tested SHI-1 Protein 4e-110 99
SF2967 NP_708741.2 hypothetical protein Not tested SHI-1 Protein 4e-110 99
unnamed AAK00459.1 unknown Not tested SHI-1 Protein 2e-111 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_18275 YP_005458159.1 putative plasmid transfer protein VFG0629 Protein 2e-110 99