Gene Information

Name : SSON53_17575 (SSON53_17575)
Accession : YP_005458019.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3295134 - 3295616 bp
Length : 483 bp
Strand : +
Note : -

DNA sequence : 
GTGATTGATTATAAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACAC
TGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCAAATCTTACCA
TCGACTTTATGTATAACAAAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAGT
AAATCAATACGGCGAAATATTGAATACACATGGATTGAAAACTATGACACAGCCCATTTAACATCAAAGAAAGTTAATAA
GTTTGAGATTATGGATCAAGTTGATGATGATAGACTTGCACAACTTATTCCTGATTTTTATGTCTTTCCAGAAAAAAGTG
TAAGCTATAATATACTAAAGCAAGGTAAGCATGCTTTTATTTTGAGCATTGGTAACAGAGCAATAATGCATTGTGCAAGG
TAA

Protein sequence : 
MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMYNKKNKTGTVALSGTWQQGNRES
KSIRRNIEYTWIENYDTAHLTSKKVNKFEIMDQVDDDRLAQLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3705 NP_311732.1 hypothetical protein Not tested LIM Protein 1e-68 99
fidL AAD16955.1 FidL Virulence SPI-3 Protein 7e-25 43
fidL NP_462657.1 inner membrane protein Virulence SPI-3 Protein 1e-24 43
fidL NP_458173.1 putative exported protein Virulence SPI-3 Protein 7e-25 42
fidL YP_218666.1 inner membrane protein Virulence SPI-3 Protein 7e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_17575 YP_005458019.1 hypothetical protein VFG0569 Protein 3e-25 43