Gene Information

Name : SSON53_01565 (SSON53_01565)
Accession : YP_005454894.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Unknown
Product : IS600 orf1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 320540 - 320842 bp
Length : 303 bp
Strand : -
Note : COG2963 Transposase and inactivated derivatives

DNA sequence :
ATGAGCAGAAAAACCCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCTCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA

Protein sequence :
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKATAYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 6e-40 100
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 6e-40 100
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-39 99
unnamed AAF09021.1 unknown Not tested SHI-O Protein 2e-39 99
unnamed AAF09029.1 unknown Not tested SHI-O Protein 2e-39 99
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 9e-40 99
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 8e-34 98
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 8e-34 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_01565 YP_005454894.1 IS600 orf1 VFG1707 Protein 4e-40 99