Gene Information

Name : SSON53_15780 (SSON53_15780)
Accession : YP_005457664.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2959907 - 2960308 bp
Length : 402 bp
Strand : -
Note : COG2963 Transposase and inactivated derivatives

DNA sequence :
GTGGGAACCAAAGTGTCAGATATGCAGAAAAATGTGACTCCCGGCAGGCGAAAAGGCTGCCCTAATTATCCTCCCGAATT
TAAACAGCAGCTCGTTGCTGCCTCCTGTGAACCCGGGATATCCATCTCAAAACTTGCTCTTGAAAATGGCATTAACGCCA
ATCTGTTGTTCAAATGGCGACAACAATGGCGCGAGGGAAAGCTGCTATTACCTTCTTCAGAGAGCCCCCAGCTACTTCCT
GTGACTCTCGATGCAGCTGCCGAACAGCCAGAATCGCTCGCAGAGGACCCGAAAACCCTCAGTATCAGCAGTGAGGTAAC
GTTCCGGCACGGGACGCTCCGCTTCAATGGCAATGTCAGCGAAAAGCTCCTGACTCTGCTGATACAGGAACTGAAGCGAT
GA

Protein sequence :
MGTKVSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLP
VTLDAAAEQPESLAEDPKTLSISSEVTFRHGTLRFNGNVSEKLLTLLIQELKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 3e-49 99
unnamed AAL99257.1 unknown Not tested LEE Protein 5e-46 99
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 5e-46 99
unnamed AAC31492.1 L0013 Not tested LEE Protein 2e-49 99
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-49 99
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 3e-49 99
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 6e-46 98
unnamed AAL08462.1 unknown Not tested SRL Protein 1e-48 98
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-22 53
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 2e-22 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_15780 YP_005457664.1 hypothetical protein VFG0791 Protein 1e-49 99
SSON53_15780 YP_005457664.1 hypothetical protein VFG1708 Protein 1e-49 99
SSON53_15780 YP_005457664.1 hypothetical protein VFG1053 Protein 5e-49 98
SSON53_15780 YP_005457664.1 hypothetical protein VFG1518 Protein 2e-46 98
SSON53_15780 YP_005457664.1 hypothetical protein VFG1697 Protein 6e-23 53