Gene Information

Name : SSON53_15700 (SSON53_15700)
Accession : YP_005457648.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Unknown
Product : IS629 ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2943451 - 2943969 bp
Length : 519 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
GTGGCAGAACGACCTGACCAGCTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTT
CATCATTGATGTGTTTGCCGGATACATCGTGGGGTGGCGGGTCTCATCGTCCATGGAAACGACATTCGTGCTGGATGCAC
TGGAGCAGGCGTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCC
TACACACAGCGGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGA
GAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCATAC
TCACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCATACTCCTCCGGCAGAAGCAGAAAAAGCT
TATTATGCTTCCATCGGAAACGATGATCTGGCAGCCTGA

Protein sequence :
MAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLA
YTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELAILTWVDWYNNRRLLERLGHTPPAEAEKA
YYASIGNDDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 9e-74 98
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 1e-73 98
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 8e-74 98
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 3e-70 94
r15 AAC61720.1 putative transposase R15 Not tested PAI I CFT073 Protein 4e-50 93
unnamed AAT48693.1 unknown Not tested PAI I 4787 Protein 3e-50 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_15700 YP_005457648.1 IS629 ORF2 VFG1715 Protein 8e-71 94