Gene Information

Name : SSON53_15670 (SSON53_15670)
Accession : YP_005457642.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Unknown
Product : protein encoded within IS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2939103 - 2939561 bp
Length : 459 bp
Strand : -
Note : COG3436 Transposase and inactivated derivatives

DNA sequence : 
ATGAACGACATCTCTTCTGACGACATCTTCCTGCTGAAACAGCGCCTTGCCGAACGTCAGTTGAAAACGAAACCGCTGCT
GAAATCCCTGGAAAGCTGGCTGCGTGAAAAGATGAAAACCCTGTCGCGACACTCAGAACTGGCGAAAGCGTTCGCATATG
CCCTGAACCAGTGGCCGGCGCTGACGTACTATGCAGATGATGGCTGGGCTGAGGCGGACAATAACATCGCTGAAAATGCG
TTGCGGATGGTCAGTCTGGGCCGCAAAAACTACCTGTTCTTCGGTTCGGATCATGGAGGAGAGCGGGGAGCGCTGCTGTA
CAGCCTGATCGGGACGTGCAAACTGAACGGAGTGGAGCCAGAAAGCTACCTCCGCTATGTCCTTGATGTCATAGCCGACT
GGCCGATAAACCGGGTCGGCGAACTGCTCCCCTGGCGCGTAGCACTGCCGACTGAATAA

Protein sequence : 
MNDISSDDIFLLKQRLAERQLKTKPLLKSLESWLREKMKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENA
LRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0015 CAD33721.1 putative IS protein Not tested PAI I 536 Protein 4e-56 90
SF2970 NP_708744.1 hypothetical protein Not tested SHI-1 Protein 1e-44 88
unnamed AAK00461.1 unknown Not tested SHI-1 Protein 9e-45 88
Z1158 NP_286693.1 hypothetical protein Not tested TAI Protein 8e-15 41
Z1597 NP_287101.1 hypothetical protein Not tested TAI Protein 8e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_15670 YP_005457642.1 protein encoded within IS VFG1462 Protein 2e-56 90
SSON53_15670 YP_005457642.1 protein encoded within IS VFG0632 Protein 4e-45 88