Gene Information

Name : SSON53_14830 (SSON53_14830)
Accession : YP_005457478.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Unknown
Product : putative oxidoreductase Fe-S binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2776918 - 2778897 bp
Length : 1980 bp
Strand : -
Note : COG1142 Fe-S-cluster-containing hydrogenase components 2

DNA sequence :
ATGAATCGTTTTATTATGGCCAACAGTCAGCAATGTCTGGGTTGTCATGCTTGTGAAATCGCCTGTGTCATGGCTCACAA
TGATGAGCAACATGTCCTGAGCCAACACCATTTTCATCCCCGAATTACGGTTATCAAACATCAGCAGCAACGTAGTGCAG
TGACCTGTCACCATTGTGAAGATGCGCCCTGCGCCCGTAGCTGCCCTAATGGCGCAATCAGCCACGTTGATGACAGCATT
CAGGTCAATCAGCAAAAGTGTATTGGCTGTAAATCCTGCGTGGTGGCCTGTCCGTTTGGTACGATGCAAATCGTCCTGAC
ACCCGTCGCGGCAGGAAAAGTAAAAGCCACGGCGCATAAATGCGACCTTTGTGCAGGGCGCGAAAACGGTCCTGCCTGTG
TCGAGAATTGCCCGGCGGACGCGCTGCAACTGGTCACTGACGTCGCACTCTCCGGCATGGCGAAATCCCGCCGCTTGCGC
ACCGCACGTCAGGAGCATCAACCGTGGCATGCCAGTACCGCTGCACAAGAAATGCCGGTAATGAGTAAAGTCGAACAAAT
GCAGGCAACGCCCGCGCGTGGCGAGCCGGATAAACTGGCGATTGAAGCGCGCAAAACCGGTTTTGATGAAATTTATCTGC
CATTCCGTGCCGATCAGGCACAACGGGAAGCCTCGCGCTGCCTTAAATGCGGCGAGCACAGCGTTTGTGAATGGACCTGC
CCGCTGCATAACCATATTCCGCAGTGGATTGAACTGGTGAAAGCCGGAAACATCGACGCCGCCGTCGAGCTTTCTCACCT
GACCAACACCCTGCCGGAAATTACCGGACGCGTTTGTCCGCAGGACCGTTTGTGTGAAGGTGCCTGTACTATTCGCGATG
AGCACGGCGCGGTAACTATCGGCAACATTGAACGCTACATTTCAGATCAGGCGTTGGCGAAAGGTTGGCGTCCTGACTTA
AGCCATGTCACCAAAGTGGACAAGCGGGTGGCGATTATCGGTGCGGGTCCGGCAGGGCTGGCCTGTGCGGATGTTCTGAC
CCGCAATGGCGTGGCGGTGACGGTGTACGATCGCCATCCAGAAATTGGTGGCTTGCTCACTTTCGGCATTCCTTCTTTCA
AACTGGATAAATCCCTGCTGGCACGCCGTCGGGAAATCTTCAGCGCGATGGGGATTCACTTCGAACTCAATTGTGAAGTG
GGTAAAGATGTCTCTTTGGATTCGCTTTTGGAACAATACGACGCGGTCTTCGTTGGCGTAGGCACTTACCGTTCCATGAA
AGCGGGTTTACCCAATGAAGATGCGCCGGGCGTTTATGACGCGCTGCCGTTCCTCATCGCCAACACTAAACAGGTGATGG
GACTCGAAGAGCTACCGGAAGAGCCGTTTATCAATACCGCCGGACTCAACGTCGTGGTACTGGGCGGCGGCGACACCGCG
ATGGACTGTGTGCGTACCGCGCTGCGCCACGGCGCGAGTAACGTCACCTGCGCTTATCGTCGTGATGAAGCTAACATGCC
AGGCTCGAAGAAAGAGGTGAAGAACGCCCGCGAAGAGGGGGCCAACTTCGAATTTAACGTCCAGCCGGTGGCGCTTGAGC
TGAATGAGCAAGGTCACGTTTGCGGAATTCGTTTCCTGCGCACGCGTCTTGGCGAGCCGGATGCCCAGGGGCGCCGGCGA
CTTGTACCGATTGAGGGCAGTGAATTTGTCATGCCAGCCGATGCGGTGATTATGGCGTTTGGCTTCAATCCACACGGGAT
GCCGTGGCTGGAGTCGCACGGTGTAACGGTAGACAAATGGGGCCGCATCATCGCGGATGTGGAAAGCCAGTACCGTTACC
AGACCACCAATCCGAAAATCTTCGCCGGTGGCGACGCCGTGCGTGGTGCGGATCTGGTGGTTACCGCAATGGCAGAAGGA
CGTCATGCGGCACAGGGGATTATTGACTGGCTGGGGGTAAAATCAGTCAAATCTCACTGA

Protein sequence :
MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITVIKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSI
QVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATAHKCDLCAGRENGPACVENCPADALQLVTDVALSGMAKSRRLR
TARQEHQPWHASTAAQEMPVMSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEHSVCEWTC
PLHNHIPQWIELVKAGNIDAAVELSHLTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGWRPDL
SHVTKVDKRVAIIGAGPAGLACADVLTRNGVAVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEV
GKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTA
MDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRR
LVPIEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEG
RHAAQGIIDWLGVKSVKSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YP0342 CAF28571.1 putative oxidoreductase Not tested YAPI Protein 0.0 57