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Name : SSON53_14055 (SSON53_14055) Accession : YP_005457328.1 Strain : Shigella sonnei 53G Genome accession: NC_016822 Putative virulence/resistance : Unknown Product : prophage Sf6-like integrase Function : - COG functional category : - COG ID : - EC number : - Position : 2631274 - 2632431 bp Length : 1158 bp Strand : + Note : COG0582 Integrase DNA sequence : ATGCTCACCGTTAAGCAGATTGAAGCAGCAAAGCCGAAAGAAAAACCATACCGCCTTCTCGATGGTAATGGCCTGTACCT TTATGTTCCTGTATCCGGGAAAAAGGTATGGCAGCTTCGCTACAAGATTGACGGTAAGGAGAAAATCCTGACCGTCGGAA AATATCCGCTTATGACTTTGCAGGAAGCAAGGGATAAGGCATGGACTGCGAGGAAAGACATCTCGGTTGGCATCGTTCCG GTAAAGGCGAAAAAGGCTTCGTCTAACAACAATTCATTTAGTGCGATTTACAAGGAATGGTACGAGCACAAGAAGCAAGT CTGGTCAGTAGGCTATGCAACTGAACTTGCCAAAATGTTTGATGACGACATTTTACCCATCATCGGCGGTCTTGAGATTC AGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGATTTGAAGATCGCGGTGCAATGGAGCGAGCCAACAAAGCC CGCAGAAGATGCGGCGAGGTTTTTCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCAGA CGCCATGAAAGGATACCGCAAGAAGAACTTCCCGTTCCTTCCAGCAGACCAGATGCCTGCATTCAACAAAGCACTGGCAA CATTTTCAGGAAGTATCGTATCGCTCATTGCGACCAAAGTTTTACGCTACACAGCCCTAAGAACAAAAGAGCTTCGTTCC ATGCTATGGAAGAACGTCGATTTTGAAAACAGGATTATCACCATCGACGCCAGTGTGATGAAGGGACGCAAAATTCATGT GGTCCCGATGTCAGACCAGGTGGTTGAACTTCTCACTACGCTAAGCTCAATCACCAAACCAGTCTCAGAGTTTGTTTTTG CCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTATTGCTTGTGATCAAACAAATCGGCTATGAAGGTCTG GAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCA GCTGGCACATGCCAACGGCGGATCTGTGCGCGGTATTTACAACCATGCTCAGTATCTCGATAAGCGCAGAGAAATGATGC AGTGGTGGGCGGATTGGCTTGATGAAAAAGTGGAGTAA Protein sequence : MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIVP VKAKKASSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKA RRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQMPAFNKALATFSGSIVSLIATKVLRYTALRTKELRS MLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGL ESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 2e-80 | 48 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 1e-85 | 48 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 2e-85 | 48 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 2e-85 | 48 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 1e-85 | 48 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 5e-84 | 48 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 2e-85 | 48 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 2e-85 | 48 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 1e-84 | 48 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 2e-84 | 48 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 2e-84 | 48 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 7e-77 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSON53_14055 | YP_005457328.1 | prophage Sf6-like integrase | VFG0783 | Protein | 7e-86 | 48 |
| SSON53_14055 | YP_005457328.1 | prophage Sf6-like integrase | VFG0598 | Protein | 8e-85 | 48 |
