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Name : SSON53_13965 (SSON53_13965) Accession : YP_005457317.1 Strain : Shigella sonnei 53G Genome accession: NC_016822 Putative virulence/resistance : Virulence Product : Pili assembly chaperone, N-terminal protein Function : - COG functional category : - COG ID : - EC number : - Position : 2614069 - 2614713 bp Length : 645 bp Strand : - Note : 'COG3121 P pilus assembly protein, chaperone PapD' DNA sequence : TTGATATTTAATGAAAGCGACAAATCAATCAGCGTGACGTTGCGCAATAACGATCCGAAACTGCCTTATCTGGCCCAAAG CTGGATCGAAGATGAAAAGGGTAACAAGATCAGTTCACCGTTAACTGTTCTGCCACCGGTGCAACGCATCGATTCAATGA TGAACGGGCAGGTAAAAGTGCAGGGAATGCCGGATATCAACAAATTGCCTGCCGATCGTGAAAGCCTGTTCTACTTCAAC GTGCGTGAGATCCCGCCAAAATCAAACAAAGCCAACACGCTGCAAATAGCACTACAAACGCGTATTAAGTTGTTCTGGCG ACCGAAGGCGCTGGAGAACGTCAGCATGAAAAACCCCTGGCAATATAAGGTTACTTTAACCCGCAACGGTCAGGAATTTA CCGTCAATAACCCGACGCCGTATTACGTCATTTTCAGTAATGCCAGCACACAGAAAAATGGCAATCCTGCAGCCGGTTTC TCGCCAATAGTGATGTCGCCGAAAACCTCTGCACCGCTGAATGTGAAGATGGGTAGCGTGCCGGTACTGACCTATGTCAA CGACTATGGCGCTCGGATGCCGCTCTTTTTCACTTGCAACGGTAACAGTTGCCAGGTCGATGAAGAGCAGAGCCGCAAAG GCTGA Protein sequence : MIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKISSPLTVLPPVQRIDSMMNGQVKVQGMPDINKLPADRESLFYFN VREIPPKSNKANTLQIALQTRIKLFWRPKALENVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGF SPIVMSPKTSAPLNVKMGSVPVLTYVNDYGARMPLFFTCNGNSCQVDEEQSRKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 1e-42 | 44 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 7e-46 | 44 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 2e-45 | 44 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 2e-45 | 44 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 2e-45 | 44 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 2e-45 | 44 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 2e-45 | 44 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 8e-46 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSON53_13965 | YP_005457317.1 | Pili assembly chaperone, N-terminal protein | VFG0885 | Protein | 3e-43 | 44 |
| SSON53_13965 | YP_005457317.1 | Pili assembly chaperone, N-terminal protein | VFG1547 | Protein | 3e-46 | 44 |
| SSON53_13965 | YP_005457317.1 | Pili assembly chaperone, N-terminal protein | VFG0896 | Protein | 7e-46 | 44 |
