Gene Information

Name : SSON53_01260 (SSON53_01260)
Accession : YP_005454835.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 266712 - 267794 bp
Length : 1083 bp
Strand : -
Note : COG3520 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGGACGGAAAGAATCGGGCAGCATCCTCTTATCTGAGTCCGGGAAATCCCCCGGCAGATAAAGAGCAGAATGATCCGCT
GGCACAGGTTTTCCATAATGCCTGCTCTTACAATTTTTTTGCGATGGCGGAGCTGTTGCACCGCCTGGCAAAGGGTGAAA
AGGGGACGCCAGAATTATCCCTGCGCGACGATCCGGCACAGGAAACCCTGCGTTTCAGCGCCGATGCCAGCCTTGCCTTC
CCGTGCAGTGATATCAGTGCGCTGAAACGGGATACGTCAGGGGCATTCAGGATGACCACCACCTTTATGGGGTTACAGGG
GAGCCAGTCGCCTCTCCCCGGTTATTACCTCGCTCACCTGGCCTGGAAAGCGGTACATGAACAAAGTCCGGTAGGTGATT
TTCTGGATATGTTCAGCCACCGCCTGACCCAGTTTGTCTGGCATATCTGGCGTAAGTACCGCTATCACATCAGTTTTCGT
AACGGCGGTGTGGATGCGTTCTCGCAGCGCATGTACTCCCTTGTCGGGCTGGGCCACCGCCAGCTTCGCGATAAGCTGGC
GATTAATCACAGCAAAATGCTGGCGTATTCCGGGATCCTGGCAAATCCGGGACGATCCCCGGAAATTATCTGTGGCCTGG
TGTCCCACTGCTTTGATTTGTCAGAAGTGACACTGCAAAACTGGCAACGTCGCAAGGTGGATATTGAACCGGATCAGCAA
AATAGTCTGGGGAGCTATTCTCTTAAAAATGGCGAAAAACTGGCGGGAAGATCGGTACTGGGCAACTTTGTTCTGGGTAC
ACGAGTGCCCGATCTCAGCGGAAAATTCCAGCTCAGTATTACCAGCCTGACCCGAAAACAGTTCCTCTCTTTTCTGCCGT
CCGGCGAAAACTTCCTGCCACTGACGATGTTCGTGTCCTTCATCCTGCGCGATCAGCTTGCCTGGGACTTACATCTGGGG
CTGGCGCCGGAGCAGGTGGGCGCAATGCGCCTGGGCGATAACAAAAGTGCGCTGCTGGGCTGGACCAGCTTCCTCGGCAC
ACCGGAAGAACGACCCTCAGTCACCATCAGGGTACGGTCGTAA

Protein sequence :
MDGKNRAASSYLSPGNPPADKEQNDPLAQVFHNACSYNFFAMAELLHRLAKGEKGTPELSLRDDPAQETLRFSADASLAF
PCSDISALKRDTSGAFRMTTTFMGLQGSQSPLPGYYLAHLAWKAVHEQSPVGDFLDMFSHRLTQFVWHIWRKYRYHISFR
NGGVDAFSQRMYSLVGLGHRQLRDKLAINHSKMLAYSGILANPGRSPEIICGLVSHCFDLSEVTLQNWQRRKVDIEPDQQ
NSLGSYSLKNGEKLAGRSVLGNFVLGTRVPDLSGKFQLSITSLTRKQFLSFLPSGENFLPLTMFVSFILRDQLAWDLHLG
LAPEQVGAMRLGDNKSALLGWTSFLGTPEERPSVTIRVRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec22 YP_851423.1 hypothetical protein Not tested PAI II APEC-O1 Protein 8e-95 56
aec22 AAQ96716.1 Aec22 Not tested AGI-1 Protein 6e-95 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_01260 YP_005454835.1 hypothetical protein VFG2079 Protein 5e-60 41