Gene Information

Name : SSON53_12345 (SSON53_12345)
Accession : YP_005456999.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2281178 - 2282344 bp
Length : 1167 bp
Strand : -
Note : COG1004 Predicted UDP-glucose 6-dehydrogenase

DNA sequence : 
ATGAAAATCACCATTTCCGGTACTGGCTATGTAGGCTTGTCAAACGGGCTTCTAATCGCACAAAATCATGAGGTTGTGGC
ATTAGATATTTTACCGTCACGCGTTGCTATGCTGAATGATCGGATATCTCCTATTGTTGATAAGGAAATTCAGCAGTTTT
TGCAATCAGATAAAATACACTTTAATGCCACATTAGATAAAAATGAAGCCTACCGGGATGCTGATTATGTCATCATCGCC
ACTCCAACCGACTATGATCCTAAAACTAATTATTTCAATACATCCAGTGTAGAATCAGTAATTAAAGACGTAGTTGAGAT
AAATCCTTATGCGGTTATGGTCATCAAATCAACGGTTCCCGTTGGTTTTACCGAAGCGATGCATAAGAAATATCGTACTG
AAAATATTATTTTCTCTCCGGAATTTCTCCGTGAAGGTAAAGCCCTTTACGATAATCTCCATCCTTCACGTATTGTCATC
GGTGAGCGTTCAGAACGCGCAGAACGTTTTGCTGCGTTGTTACAGGAAGGCGCGATTAAGCAAAATATCCCGACCCTGTT
CACCGATTCGACCGAAGCAGAAGCGATTAAACTTTTTGCAAACACCTACCTAGCGATGCGCGTGGCATACTTTAACGAAC
TGGATAGCTACGCAGAAAGTTTAGGTCTGAATACTCGCCAGATTATCGAAGGCGTTTGTCTCGATCCGCGTATTGGCAAC
CATTACAACAACCCGTCGTTTGGTTATGGTGGTTATTGCTTGCCGAAAGATACCAAGCAGTTACTGGCGAACTATCAGTC
TGTGCCGAATAACCTGATCTCGGCAATTGTCGATGCAAACCGCACGCGTAAGGATTTTATTGCCGATGCCATTTTGTCAC
GCAAACCGCAAGTGGTGGGTATTTATCGTCTGATTATGAAGAGCGGTTCAGATAACTTCCGTGCGTCTTCTATTCAGGGG
ATTATGAAGCGTATCAAGGCGAAAGGCGTTGAAGTGATCATCTACGAGCCAGTGATGAAAGAAGACTCATTCTTCAACTC
TCGGCTGGAACGTGATCTCGCCATCTTCAAACAACAAGCCGACGTCATTATCTCTAACCGAATGGCAGAAGAGCTTAAAG
ATGTGGCAGATAAGGTATACACCCGCGATCTCTTTGGCAGCGACTAA

Protein sequence : 
MKITISGTGYVGLSNGLLIAQNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIA
TPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTEAMHKKYRTENIIFSPEFLREGKALYDNLHPSRIVI
GERSERAERFAALLQEGAIKQNIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADAILSRKPQVVGIYRLIMKSGSDNFRASSIQG
IMKRIKAKGVEVIIYEPVMKEDSFFNSRLERDLAIFKQQADVIISNRMAEELKDVADKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-92 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_12345 YP_005456999.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 1e-101 55