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Name : fliP (SSON53_11880) Accession : YP_005456910.1 Strain : Shigella sonnei 53G Genome accession: NC_016822 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : - COG ID : - EC number : - Position : 2197750 - 2198487 bp Length : 738 bp Strand : + Note : 'COG1338 Flagellar biosynthesis pathway, component FliP' DNA sequence : ATGCGTCGTTTGTTGTCTGTCGCACCTGTCCTTCTCTGGCTGGTTACGCCCCTCGCCTTCGCGCAACTGCCGGGTATCAC CAGCCAGCCGCTGCCTGGCGGTGGACAAAGCTGGTCGCTCCCGGTGCAGACGCTGGTGTTCATCACCTCGTTGACGTTTA TTCCGGCAATTTTACTGATGATGACCAGTTTCACCCGCATCATCATTGTTTTTGGTTTATTGCGTAACGCGCTGGGAACG CCCTCCGCGCCACCTAACCAGGTATTGCTGGGGCTGGCACTATTTTTGACCTTTTTTATTATGTCATCGGTGATCGACAA AATTTATGTCGATGCGTACCAGCCATTCAGCGAAGAGAAAATATCAATGCAGGAGGCGCTGGAAAAAGGGGCGCAGCCGC TACGTGAGTTTATGCTGCGTCAGACCCGTGAGGCAGATTTAGGGTTGTTTGCCAGACTAGCGAATACCGGCCCGTTGCAG GGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAATTGAAAACCGCATTTCAGATAGGCTT CACGATTTTCATTCCTTTTTTGATTATCGACCTGGTGATTGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTCCCCC CCGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTGCTGGTCGGTTCGCTGGCG CAGAGCTTTTACAGCTAG Protein sequence : MRRLLSVAPVLLWLVTPLAFAQLPGITSQPLPGGGQSWSLPVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGT PSAPPNQVLLGLALFLTFFIMSSVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQ GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLA QSFYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 5e-29 | 43 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-29 | 42 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 1e-29 | 42 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 1e-29 | 42 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 1e-29 | 42 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-29 | 42 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 1e-29 | 42 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 1e-29 | 42 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 1e-29 | 42 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 1e-29 | 42 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-28 | 42 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-28 | 42 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 1e-29 | 42 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 5e-25 | 41 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 5e-25 | 41 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 5e-25 | 41 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 7e-30 | 41 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 7e-29 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_005456910.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 2e-91 | 85 |
| fliP | YP_005456910.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 3e-75 | 67 |
| fliP | YP_005456910.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 3e-64 | 61 |
| fliP | YP_005456910.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 5e-60 | 56 |
| fliP | YP_005456910.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 4e-33 | 42 |
| fliP | YP_005456910.1 | flagellar biosynthesis protein FliP | VFG0827 | Protein | 6e-30 | 42 |
| fliP | YP_005456910.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 1e-30 | 41 |
| fliP | YP_005456910.1 | flagellar biosynthesis protein FliP | VFG0715 | Protein | 4e-29 | 41 |
