Gene Information

Name : SSON53_09005 (SSON53_09005)
Accession : YP_005456349.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1700552 - 1701334 bp
Length : 783 bp
Strand : -
Note : COG1484 DNA replication protein

DNA sequence :
ATGCATGAACTGGAAGTCCTGCTGAGTCGCCTGAAAATGGAGCATCTGAGTTATCACGTTGAAAGCCTGCTGGAACAGGC
AGCTAAAAAAGAGCTGAACTACCGGGAGTTCCTGTGCATGGCGCTACAGCAGGAATGGAACGGCAGGCATCAGCGCGGTA
TGGAGTCCAGGCTGAAGCAGGCTCGTCTGCCGTGGGTCAAAACGCTGGAGCAGTTCGACTTTACCTTCCAGCCGGGCATC
GACCGTAAGGTTGTCCGGGAACTGGCTGGTCTGGCGTTCGTGGAGCGCAGCGAAAACGTGATCCTGCTGGGCCCTCCTGG
TGTCGGAAAAACTCATCTGGCCATAGCTCTTGGCGTGAAAGCGGTGGATGCGGGACATCGGGTACTGTTTATGCCACTGG
ACAGACTGATCGCGACACTGATGAAAGCGAAACAGGAAAACCGGCTGGAGCGTCAGCTACAGCAACTGAGTTATGCCCGG
GTGTTGATCCTGGATGAAATAGGCTATCTGCCGATGAACAGAGAGGAAGCCAGTCTGTTCTTCCGGCTACTGAACCGTCG
ATATGAAAAAGCGAGCATCATACTGACGTCAAACAAAGGGTTCGCAGACTGGGGAGAAATGTTCGGAGATCACGTACTGG
CAACAGCGATCCTGGATCGGCTGCTACATCACTCAACCACGCTGAATATCAAAGGAGAGAGTTACCGGTTAAAAGAGAAA
CGTAAAGCTGGAGTAGACTGGCCCCCTGAATCTCCAGACAACCAGTATCACTTAAATAAGTGA

Protein sequence :
MHELEVLLSRLKMEHLSYHVESLLEQAAKKELNYREFLCMALQQEWNGRHQRGMESRLKQARLPWVKTLEQFDFTFQPGI
DRKVVRELAGLAFVERSENVILLGPPGVGKTHLAIALGVKAVDAGHRVLFMPLDRLIATLMKAKQENRLERQLQQLSYAR
VLILDEIGYLPMNREEASLFFRLLNRRYEKASIILTSNKGFADWGEMFGDHVLATAILDRLLHHSTTLNIKGESYRLKEK
RKAGVDWPPESPDNQYHLNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-47 48
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 6e-47 47
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 6e-47 47
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 6e-47 47
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 7e-47 47
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 6e-47 47
unnamed CAA21402.1 - Not tested HPI Protein 7e-47 47
api84 CAF28558.1 putative transposase Not tested YAPI Protein 6e-47 47
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 6e-47 47
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 7e-47 47
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 7e-47 47
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 5e-38 47
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-46 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_09005 YP_005456349.1 hypothetical protein VFG1515 Protein 3e-47 47
SSON53_09005 YP_005456349.1 hypothetical protein VFG1627 Protein 3e-47 47
SSON53_09005 YP_005456349.1 hypothetical protein VFG1606 Protein 3e-47 47
SSON53_09005 YP_005456349.1 hypothetical protein VFG1460 Protein 3e-38 47
SSON53_09005 YP_005456349.1 hypothetical protein VFG1663 Protein 2e-46 46