Gene Information

Name : SSON53_08165 (SSON53_08165)
Accession : YP_005456183.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Unknown
Product : tail tube protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1552277 - 1552789 bp
Length : 513 bp
Strand : +
Note : COG3498 Phage tail tube protein FII

DNA sequence :
ATGGCTGTACCAAAACATCTTCGCTTTTTTACGCTGTTTGTGGATGGTGAAAACGAAGTGGGTAAGGTGACGTCCGTCAC
TCTGCCTAAGCTGACGCGCAAAACCGACAGCTACCGGGGTGGTGGCATGATGGGAGCGGTAAGTATTGATCTCGGCCTGG
ATGACTCCGCGCTTGATGCGAGCTTTGTCATGGGGGGCGCAGTTCGTGAGCTGTTCCTTAAGTATGGCGGCACGATTGAC
GGTACGCTGCTGCGTTTTGCGGGTGAATACTACACCGACGCTGAAAGCGACCTGTATGAAGTCGAAATGCGCGGACGTGT
GACGGAAATTGATATGGGGGAAGCCAAACAGGGCGAAGCCACATCACACACTTACGCCATTAAAAACACCTACTACAAGC
TGAGTGTTAACGATCGCCCGTTGTGGGAGATTGACCTGCTGAACTTCATTTACCGGAAGGACGGCAGGGACATTGTGCCC
GATCGCATCCGTTCCGCGCTCGGGCTTGGCTGA

Protein sequence :
MAVPKHLRFFTLFVDGENEVGKVTSVTLPKLTRKTDSYRGGGMMGAVSIDLGLDDSALDASFVMGGAVRELFLKYGGTID
GTLLRFAGEYYTDAESDLYEVEMRGRVTEIDMGEAKQGEATSHTYAIKNTYYKLSVNDRPLWEIDLLNFIYRKDGRDIVP
DRIRSALGLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4300 NP_807897.1 major tail tube protein Not tested SPI-7 Protein 1e-20 47
STY4606 NP_458689.1 probable major tail tube protein Not tested SPI-7 Protein 1e-20 47
unnamed ABR13485.1 phage tail tube protein Not tested PAGI-6 Protein 5e-23 43