Gene Information

Name : SSON53_06290 (SSON53_06290)
Accession : YP_005455816.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Unknown
Product : DNA polymerase V subunit UmuD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1235589 - 1236008 bp
Length : 420 bp
Strand : +
Note : COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases)

DNA sequence :
ATGTTGTTTATCAAGCCTGCGGATCTCCGCGAAATTGTGACTTTTCCGCTATTTAGCGATCTTGTTCAGTGTGGCTTTCC
TTCACCGGCAGCAGATTACGTCGAACAGCGCATCGATCTGAATCAACTGTTGATCCAGCATCCCAGCGCGACTTACTTCG
TCAAAGCAAGTGGTGATTCTATGATTGATGGTGGAATTAGTGACGGTGATTTACTGATTGTCGATAGCGCTATTACCGCC
AGCCATGGTGATATTGTCATCGCTGCTGTTGACGGCGAGTTTACGGTGAAAAAATTGCAACTACGCCCGACGGTACAGCT
TATTCCCATGAACAGTGCGTACTCGCCCATTACCATCAGTAGCGAAGATACGCTGGATGTCTTTGGTGTGGTGATCCACG
TCGTTAAGGCGATGCGCTGA

Protein sequence :
MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITA
SHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t06650 YP_006892470.1 hypothetical protein Not tested SPI-7 Protein 2e-18 55
unnamed ABR13390.1 hypothetical protein Not tested PAGI-5 Protein 5e-11 48
rulA CAI36138.1 SOS-response transcriptional repressor Not tested PPHGI-1 Protein 5e-09 42