Gene Information

Name : ssuB (SSON53_05060)
Accession : YP_005455586.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Resistance
Product : aliphatic sulfonates transport ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1011833 - 1012600 bp
Length : 768 bp
Strand : -
Note : 'COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component'

DNA sequence :

ATGAATACTGCTCGTCTGAACCAGGGCACACCATTGTTGCTCAATGCAGTAAGCAAACATTACGCGGAAAATATCGTCCT
GAACCAACTGGATTTACATATTCCGGCAGGTCAGTTTGTGGCGGTGGTGGGCCGCAGCGGTGGTGGCAAAAGTACCCTGC
TGCGCCTGCTGGCAGGTCTGGAAACGCCAACCGCAGGCGATGTGTTAGCGGGCACCACACCGCTGGCTGAGATTCAGGAA
GACACGCGAATGATGTTTCAGGATGCGCGTCTGCTGCCGTGGAAATCGGTGATTGATAACGTTGGGTTAGGCCTTAAAGG
CCAGTGGCGCGATGCCGCGCGTCGGGCGTTGGCTGCAGTAGGACTGGAGAATCGCGCCGGGGAATGGCCTGCCGCACTTT
CTGGCGGGCAGAAACAGCGTGTGGCGCTGGCAAGAGCGTTGATTCATCGACCGGGTTTATTGTTGCTTGATGAACCGCTC
GGGGCACTGGACGCCTTAACGCGACTCGAGATGCAGGATTTGATTGTGTCACTTTGGCAGCAGCACGGCTTTACCGTACT
GTTGGTGACGCATGATGTGAGCGAAGCGGTAGCAATGGCTGACCGGGTGTTGTTAATTGAAGAGGGAAAAATTGGTCTGG
ATTTGACAGTGGATATCCCCCGTCCGCGTCGATTAGGGTCGGTGCGATTAGCGGAGCTGGAAGCGGAAGTATTGCAACGG
GTAATGCGGCGTGGGCATTCTGAACAACTGATTCGGCGTCATGGTTAA

Protein sequence :

MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPLAEIQE
DTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAARRALAAVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPL
GALDALTRLEMQDLIVSLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVDIPRPRRLGSVRLAELEAEVLQR
VMRRGHSEQLIRRHG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	ABA47263.1	ABC transporter	Not tested	S-PAI	Protein	2e-32	48

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
ssuB	YP_005455586.1	aliphatic sulfonates transport ATP-binding subunit	NC_008702.1.4606598.	Protein	2e-14	41