Gene Information

Name : Rahaq2_5043 (Rahaq2_5043)
Accession : YP_005202482.1
Strain :
Genome accession: NC_016819
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 46471 - 46770 bp
Length : 300 bp
Strand : +
Note : PFAM: Transposase

DNA sequence :
ATGACCGGACGTAACAGACGCAATTTTAGCCCCGAGTTTCGCCTCGAAGCTGCCCAGCTTGTACTCGATCAGCACTACAC
CGTTGCCGCCGCTGCCACTGCGATGAATGTCGGCAAATCCACGATGGACAAATGGGTTCGACAACTGAAAGATGAGCGAG
CGGGAAAATCACCCATAGCTTCACCCATGACACCTGAGCAGATTGAGATACGTGAGCTAAAGAAAAGACTTCAACGCGTT
GAAATGGAAAGAGATATCCTGTGGAAATTTACGGAATACATGGTCCTCCCGGACGTGTAA

Protein sequence :
MTGRNRRNFSPEFRLEAAQLVLDQHYTVAAAATAMNVGKSTMDKWVRQLKDERAGKSPIASPMTPEQIEIRELKKRLQRV
EMERDILWKFTEYMVLPDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api80 CAF28554.1 putative transposase Not tested YAPI Protein 2e-25 71
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 5e-27 71
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-28 71
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-28 71
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-28 71
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-28 71
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 2e-28 71
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 2e-28 71
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-28 71
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-28 71
l7045 CAD33744.1 - Not tested PAI I 536 Protein 1e-25 65
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 1e-25 65
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 2e-20 53
aec66 AAW51749.1 Aec66 Not tested AGI-3 Protein 4e-19 49
ECO111_3778 YP_003236113.1 putative IS602 transposase OrfA Not tested LEE Protein 6e-19 49
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 2e-19 48
Z5088 NP_290240.1 hypothetical protein Not tested LEE Protein 2e-19 48
unnamed AAC31483.1 L0004 Not tested LEE Protein 1e-19 48
ECs4535 NP_312562.1 hypothetical protein Not tested LEE Protein 2e-19 48
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 2e-15 45
unnamed CAD42047.1 hypothetical protein Not tested PAI II 536 Protein 6e-12 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_5043 YP_005202482.1 transposase VFG1123 Protein 5e-29 71
Rahaq2_5043 YP_005202482.1 transposase VFG1485 Protein 5e-26 65
Rahaq2_5043 YP_005202482.1 transposase VFG1553 Protein 7e-21 53
Rahaq2_5043 YP_005202482.1 transposase VFG0784 Protein 5e-20 48
Rahaq2_5043 YP_005202482.1 transposase VFG1566 Protein 2e-12 44