Gene Information

Name : Rahaq2_1004 (Rahaq2_1004)
Accession : YP_005199038.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Resistance
Product : polar amino acid ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1043165 - 1043917 bp
Length : 753 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGCCACTGATCACCATCAATCAGGTTCAGAAATTTTACGGTCAGAACCACGTACTGAAAGGCGTGGATCTGGATATTGA
CAGCGGCGAAGTGATTTCGATCATCGGCCGCAGCGGTTCAGGGAAAAGCACGCTGTTACGCTGCATGAACGGGCTGGAAG
GCTATCAGGAAGGCAGCATCAAACTCGGCGGGATGACCATTACCGACCGCGATTCTCAGGCGCGTGATATCAGCCGTTCC
GTGGGCATGGTGTTCCAGAGCTTCAATCTTTTTCCGCACATGACCGCACTGGAAAACGTCATGCTGGCGCCGCGCCGCGT
GCTGAAAAAATCTGCCACCGAGTGCCGTGAACTGGCCGCGCAGATGCTGGCGAAAGTCGGGCTCGCGGATCGCATGGATT
ATTACCCGTCCAGCCTTTCCGGCGGTCAGCAGCAACGTGTGGCCATTGCCCGTGCGCTGGCGATGAACCCGAAAGTGCTG
CTGTGTGATGAAATCACCTCAGCGCTGGATCCGGAATTAGTCGGCGAGGTACTGAAAGTGCTCGAGCAACTGGCGAAAGA
GGGCATGACGCTGGTGCTGGTGACGCACGAAATGAATTTTGCCCGCGAAGTGGGCGACCGCGTAGTGTTTATGCATCAGG
GCACCGTGTGGGAACAGGGCGAAAGCCGGGCGCTGTTTGCCAACCCGCAAACCCCCGAGTTAAGACAGTTTATCGCCTCC
GTGCGCGGCCTGAATGAGGCTGCTTCAAGCTAA

Protein sequence :
MPLITINQVQKFYGQNHVLKGVDLDIDSGEVISIIGRSGSGKSTLLRCMNGLEGYQEGSIKLGGMTITDRDSQARDISRS
VGMVFQSFNLFPHMTALENVMLAPRRVLKKSATECRELAAQMLAKVGLADRMDYYPSSLSGGQQQRVAIARALAMNPKVL
LCDEITSALDPELVGEVLKVLEQLAKEGMTLVLVTHEMNFAREVGDRVVFMHQGTVWEQGESRALFANPQTPELRQFIAS
VRGLNEAASS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-24 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 42
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 3e-33 41
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_1004 YP_005199038.1 polar amino acid ABC transporter ATPase NC_012469.1.7685735. Protein 6e-27 44