Gene Information

Name : Rahaq2_0826 (Rahaq2_0826)
Accession : YP_005198876.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 868333 - 868899 bp
Length : 567 bp
Strand : +
Note : PFAM: Resolvase, N terminal domain

DNA sequence : 
ATGAGCAAGTTTGGTTACATACGAGTATCAACCGCAGAGCAGAACACAGCACGTCAGGAAGCAGCATTGGAGCCGCTGTG
TGATGAGCTTGTAATAGATAAGGTATCAGGCAAGAGCACTGACAGACCGCAGTTACAACTCTTGTTACAGCGTGTGCGTA
CTGGTGATGAAGTGATAGTGAAGAGTGTTGATCGTCTGGCACGTAACACTAAGGATCTCCTCACAATATTAGATGAGCTG
CTAGCCGCTGGTGTTACGGTTCGATTCATTGATAACGGAATGGAGTTCTCAGAAAACCCAACATCCCGATTCATGATCAC
TATGTTGGGTGCAGTTGGCGAGTTAGAGCGTAGCTTCATCCGTCAACGCCAGTCAGAAGGAATTGCAGTTGCTAAGACAG
AGGGCAAGTTCAAAGGTCGCAGCAAGAACAGCGTGTTACGACAAGAGGTGCAGAAGCTACTCGAACGCGGCTTAAACAAT
GATGAGGTCGCTAAGCTGGCTGGTTGTGGCGTTGCAACCGTGTACCGTATTAAACGTGAACTCAACTCAGAACCCAGTAA
TACATAG

Protein sequence : 
MSKFGYIRVSTAEQNTARQEAALEPLCDELVIDKVSGKSTDRPQLQLLLQRVRTGDEVIVKSVDRLARNTKDLLTILDEL
LAAGVTVRFIDNGMEFSENPTSRFMITMLGAVGELERSFIRQRQSEGIAVAKTEGKFKGRSKNSVLRQEVQKLLERGLNN
DEVAKLAGCGVATVYRIKRELNSEPSNT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res YP_005124341.1 DNA-invertase Not tested Not named Protein 3e-19 45
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 2e-21 42
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 2e-21 42
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 3e-21 42
tpnR ADZ05795.1 resolvase Not tested AbaR17 Protein 4e-14 42
ABTW07_3873 YP_005797121.1 transposon Tn3 resolvase Not tested AbaR4e Protein 6e-14 42
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 2e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_0826 YP_005198876.1 site-specific recombinase, DNA invertase Pin VFG1030 Protein 1e-21 42