Gene Information

Name : Rahaq2_0818 (Rahaq2_0818)
Accession : YP_005198869.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 859181 - 860140 bp
Length : 960 bp
Strand : +
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD

DNA sequence :
ATGTCAAAACAAGATAATGCGCGTCCTCAGGATGTTACGCCTGAGCAGGCGGCACAAGCGGTCAATGAGGCCGATCAGAG
CCTGACTGAGCAGTTTCTGGATATGCTCTGGATCGAGCGCAATCTCGCTGAAAATACGTTGTCGTCCTACCGTCAGGATC
TGAAATCCCTGCTGGGCTGGCTGCATCATAACAACACGGATCTGCTGCATGTCAGCGCCGAAGATTTACAGCTATTCCTT
TCCGAGAGGATCGAGGGGGGATACAAAGCCACCAGCTCAGCACGGTTGCTCAGCGCGATGCGTCGCCTCTTTCAGTATAT
GAACCGCGAATCCGTGCGCCAGGATGACCCGACCGCGCTGCTGTCTTCGCCAAAATTACCGCAACGCCTGCCGAAAGACC
TCAGCGAGGCGCAGGTTGACGCATTGCTGGCCTCACCGAGTGTTGATGTGCCTCTTGAACTGCGCGATAAAGCTATGCTG
GAGCTGCTTTATGCCACCGGTTTGCGTGTTTCCGAACTGGTCGGACTGACGCTCAGCGATCTGAGCCTGCGCCAGGGGGT
GGTGCGGGTTATCGGTAAAGGCAACAAAGAACGGCTGGTACCGATGGGCGAAGAAGCCGTGTACTGGATCGAAAATTATT
TCGAACACGGCAGGCCGTGGCTGCTGAACGGACAGTCGCTGGATATCGTGTTCCCCAGTAACCGGGCGCAGCAAATGACA
CGCCAGACGTTCTGGCATCGCATCAAACACTATGCGATCCTTGCGGGCATTGATGCGGAACGGTTGTCTCCCCACGTTCT
GCGCCATGCTTTCGCCACCCACTTATTGAATCACGGTGCGGATCTGCGCGTCGTGCAAATGTTGTTAGGTCACAGTGACT
TATCGACCACGCAAATCTATACCCATGTAGCGACTGAACGACTCAAACTGCTACATCAACAACATCATCCCCGTGCGTAA

Protein sequence :
MSKQDNARPQDVTPEQAAQAVNEADQSLTEQFLDMLWIERNLAENTLSSYRQDLKSLLGWLHHNNTDLLHVSAEDLQLFL
SERIEGGYKATSSARLLSAMRRLFQYMNRESVRQDDPTALLSSPKLPQRLPKDLSEAQVDALLASPSVDVPLELRDKAML
ELLYATGLRVSELVGLTLSDLSLRQGVVRVIGKGNKERLVPMGEEAVYWIENYFEHGRPWLLNGQSLDIVFPSNRAQQMT
RQTFWHRIKHYAILAGIDAERLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKLLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-60 54
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-60 54