Gene Information

Name : Rahaq2_0792 (Rahaq2_0792)
Accession : YP_005198845.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 834396 - 835592 bp
Length : 1197 bp
Strand : -
Note : PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit

DNA sequence :
ATGGCAATTAAAATCGAAGTAAAGAACCTTTATAAGGTATTTGGCGAAAACCCGGATCGCGCTTTCAAGATGATTGACGC
AGGCAAGGGTAAAGAAGAAATTTTTGAGAAAACAGGTCTTTCACTTGGCGTTAAGAATGCCAGTCTGGCCATTGAAGAAG
GCGAGATTTTCGTCATCATGGGGTTATCCGGTTCCGGTAAATCCACCATGGTACGCCTTCTCAATCGTCTGATAGAGCCC
ACCCGCGGCGAAGTCCTGATCGACGGCGAAGATATCGCCAAAATCTCAGAAGCAAAATTACGCCAGGTACGCCGCAGCAA
AATCAGTATGGTGTTTCAGTCTTTTGCGCTGATGCCACACCTGACCGTGTTGAACAACACGGCGTTTGGTATGGAGCTGG
CAGGTGTGCCGGTGGAAGAGCGCAATGCCAAAGCGATTGATGCACTGCGTCAGGTCGGGCTGGAAAACTATGCCAACTCT
TATCCGGATGAATTGTCCGGCGGGATGCGTCAGCGTGTCGGTTTGGCCCGCGCGATGGCCAACAACCCTGATATTCTGCT
GATGGATGAAGCCTTCTCGGCACTCGACCCGTTAATTCGTACCGAAATGCAGGATGAACTGGTGAAGCTTCAGGCTCAGC
ATCAGCGCACCATCGTGTTTATTTCCCATGATCTGGACGAAGCCATGCGTATCGGCGACCGTATCGCCATTATGCAGGGC
GGCGAAGTGGTGCAGGTCGGCACGCCGGAAGACATTCTCAATAATCCGGCCAACGATTATGTGCGCACCTTCTTCCGTGG
TGTGGATATCAGTCAGGTCTTCAGCGCCAAAGACATTGCCCGCCGTCGTGGCGCGCTTATTCGTAAAACCCCCGGTTTTG
GTCCCCGTGCCGCCCTCAAGCTGCTCGAAGATGAAGACCGCGAATATGGTTATGTGCTTGAACGTGGACAGAAATTCATC
GGCGTGGTGTCGATTGAATCGCTGAAAACTGCGCTCAAAACCAATCAGCCGCTGGAAAGCGCCCTGCTGGAATCTCCGGC
AGCCGTGCAGGCAGACATGCCACTCAGCGAACTGATTTCTCATGTCGCCGCCGCGCCTTGCGCCGTGCCGGTCATCAATG
AGGACAATAACTATATCGGCATTATTTCCAAAGCCATGCTGCTTCAGGCTCTGGACAAAGAAGGGGGTAACGAATGA

Protein sequence :
MAIKIEVKNLYKVFGENPDRAFKMIDAGKGKEEIFEKTGLSLGVKNASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP
TRGEVLIDGEDIAKISEAKLRQVRRSKISMVFQSFALMPHLTVLNNTAFGMELAGVPVEERNAKAIDALRQVGLENYANS
YPDELSGGMRQRVGLARAMANNPDILLMDEAFSALDPLIRTEMQDELVKLQAQHQRTIVFISHDLDEAMRIGDRIAIMQG
GEVVQVGTPEDILNNPANDYVRTFFRGVDISQVFSAKDIARRRGALIRKTPGFGPRAALKLLEDEDREYGYVLERGQKFI
GVVSIESLKTALKTNQPLESALLESPAAVQADMPLSELISHVAAAPCAVPVINEDNNYIGIISKAMLLQALDKEGGNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 3e-88 48