Gene Information

Name : Rahaq2_0706 (Rahaq2_0706)
Accession : YP_005198772.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : P pilus assembly protein, chaperone PapD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 755587 - 756315 bp
Length : 729 bp
Strand : +
Note : PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain

DNA sequence : 
ATGAAACAAAATTTAATTAAATGCACTCTGGCTGTATTACTCGCTGCGGGATTTTGCCAATCTGCTAATGCAGATTTAGT
TCTTTCAGGGACTCGCGTTATATTTCCGGCAGAGAAAAAAGATGTCACAGTACAACTGACGAATAAGGGAACTCATCCTT
TATTAGCACAATCATGGATAGATGCCGGTGACCCATCTGCTCGCCCGGAGTCTGTAGATGTCCCTTTCTATTTGACACCA
CCCGTTTCGCGAATCGATCCGGAAAAAGGCCAGACGCTGCGTATTGTTTATAATCAGCCAAAACTACCCAAAGATCGTGA
AAGTGTCTTTTGGTTAAACGTATTAGAAATTCCTGCAAAAGCCAAGAAAGGTGAAAGCAGTGAAGTGGATAATACTTTAC
AACTTGCATTCCGTACCCGCGTAAAAATATTTTATCGTCCGACGGGTTTAAAATCCCAGCCGAATCTTGCTGCGAAAGAT
GTTATCTGGAGCAAAGTCGGGACGAATAAGATTAAAGCTAATAACCCTACGCCATATTACATTTCTTACTCAGCAGTTAA
CTTAAGTTCTGGTGCTAAGAAAGTGGAGTTAGGTGATGCGATGTTAGCGCCTTTTAGCACGACAGAGTTACAATCCAAAC
AAAATATTAATGAAAATTCATGGGCAATAAATTACGCATTCATTAATGATTACGGTGGTTCGGAAAACGGCAATGCAGCG
CTTAAATAA

Protein sequence : 
MKQNLIKCTLAVLLAAGFCQSANADLVLSGTRVIFPAEKKDVTVQLTNKGTHPLLAQSWIDAGDPSARPESVDVPFYLTP
PVSRIDPEKGQTLRIVYNQPKLPKDRESVFWLNVLEIPAKAKKGESSEVDNTLQLAFRTRVKIFYRPTGLKSQPNLAAKD
VIWSKVGTNKIKANNPTPYYISYSAVNLSSGAKKVELGDAMLAPFSTTELQSKQNINENSWAINYAFINDYGGSENGNAA
LK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 8e-51 49
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 5e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_0706 YP_005198772.1 P pilus assembly protein, chaperone PapD VFG1468 Protein 3e-42 44
Rahaq2_0706 YP_005198772.1 P pilus assembly protein, chaperone PapD VFG0007 Protein 4e-43 42