Gene Information

Name : Rahaq2_0055 (Rahaq2_0055)
Accession : YP_005198149.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 60618 - 62156 bp
Length : 1539 bp
Strand : +
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGGCTTATGATAAAAATCCTCATGCCGTCAAACCGGAAGAATACGGTTTCCCGCTGAAACTCAAAAAACAATACGACAA
CTTCATTGGCGGTGAATGGGTCGCGCCGGTGAAAAAACAGTATTACGACAACCTGACGCCGGTGACCGGCGAGGTATTGT
GTCAAGTGGCAAGTTCCAGCACCGATGACGTCGATCTGGCGCTGGATGCCGCCCATCAAGCGAAAGACGCATGGGGAAAA
ATGCCGGTGCAGCAGCGAGCAAACTTATTGCTGAAAGTCGCCGATCGCATGGAACAAAACCTTGAACTGCTGGCAAATGC
TGAAACCTGGGATAACGGCAAACCGATCCGCGAAACCAGCGGCGCAGACGTGCCGTTAGCCATTGACCATTTCCGTTATT
TCGCCTCCTGCGTGCGTGCACAGGAAGGCGGGATCAGCGAAATCGACAGCGAAACCGTAGCCTATCATTTCCACGAACCG
CTGGGCGTGGTGGCACAAATTATCCCGTGGAATTTCCCGCTGCTGATGGCGTGCTGGAAAATGGCACCGGCGCTGGCGGC
AGGTAACTGCATCGTGCTTAAACCGGCCAAACTGACGCCGCTGTCTGTTCTGTTGCTGATGGAACTGGTACAGGACATTC
TGCCTGCTGGCGTCATTAACGTGGTCAACGGCGCGGGCGGGGAAATTGGCGAATATCTGGCGACCTCCAAACGTATCGCC
AAAGTTGCTTTCACCGGTTCGACGGAAGTCGGCCAGCGGATCGCCGGCTATGCCGCACAAAACCTGATCCCGGCTACGCT
GGAACTGGGCGGTAAATCGCCGAATATCTTCTTCGCCGACGTGATGGATAAAGAGGACGAATTCTTCGACAAAGCGCTGG
AAGGGTTCGCGCTATTTGCTTTCAATCAGGGTGAAGTCTGTACCTGTCCGAGCCGTGCGCTGGTGCAGGAATCTATCTAC
GAACGCTTTATGGAACGGGCGATCAAACGGGTTGAAGCGATCAAAACCGGTAATCCGCTGGATATGGAAACCCAGATGGG
GGCGCAGGTTTCAGCCGGGCAGATGAAAACCATTCTGGATTACATCGAAATCGGTAAGAAAGAGGGGGCGGAAGTGCTGA
CCGGCGGTGCGAAGAAAAAACTTGAAGGCTCGCTGAACGAAGGGTATTACCTGCAACCGACCATTTTGCTGGGTAAAAAC
AACATGCGCGTCTTCCAGGAAGAAATTTTCGGACCGGTTCTGGCGGTAACAACGTTCAAAGATATGGATGATGCGCTGCA
AATCGCCAATGATACGGCTTACGGGCTGGGGGCGGGCGTCTGGAGCCGTGACGGCAATGTGGCGTATCACATGGGGCGCA
ACATTCAGGCTGGTCGTGTCTGGACCAACTGTTACCACGCGTATCCGGCACATGCGGCGTTCGGTGGCTACAAACAGTCC
GGTATCGGGCGTGAAACCCACAAGATGATGCTGGATCACTACCAGCAAACCAAATGCTTACTCGTTTCTTATTCGAGTAA
ACCGCTGGGATTATTCTAA

Protein sequence :
MAYDKNPHAVKPEEYGFPLKLKKQYDNFIGGEWVAPVKKQYYDNLTPVTGEVLCQVASSSTDDVDLALDAAHQAKDAWGK
MPVQQRANLLLKVADRMEQNLELLANAETWDNGKPIRETSGADVPLAIDHFRYFASCVRAQEGGISEIDSETVAYHFHEP
LGVVAQIIPWNFPLLMACWKMAPALAAGNCIVLKPAKLTPLSVLLLMELVQDILPAGVINVVNGAGGEIGEYLATSKRIA
KVAFTGSTEVGQRIAGYAAQNLIPATLELGGKSPNIFFADVMDKEDEFFDKALEGFALFAFNQGEVCTCPSRALVQESIY
ERFMERAIKRVEAIKTGNPLDMETQMGAQVSAGQMKTILDYIEIGKKEGAEVLTGGAKKKLEGSLNEGYYLQPTILLGKN
NMRVFQEEIFGPVLAVTTFKDMDDALQIANDTAYGLGAGVWSRDGNVAYHMGRNIQAGRVWTNCYHAYPAHAAFGGYKQS
GIGRETHKMMLDHYQQTKCLLVSYSSKPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-145 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-151 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-151 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-151 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-150 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_0055 YP_005198149.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 1e-145 64