Gene Information

Name : Rahaq2_0501 (Rahaq2_0501)
Accession : YP_005198575.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 511740 - 512402 bp
Length : 663 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGAAGCTGCTGATAGTGGAAGATGATGAACTTTTACGGCAGGGATTAATGCTGGCACTTACCAGTGAAAATTATGCATG
CGACTGCGCTTCTACTGCGGCTGAGGCGCAAAGCCTGATTCAGGCCAGCCAGTACAGTCTGGTGATCCTGGACTTAGGAT
TGCCAGATAAAGATGGCGCAACGTTGTTACGTCAGTGGCGACGTCAGAGCATTTCCCTGCCCGTCCTTATCCTTACAGCC
CGTGATGCACTCGAAGACCGCGTCGATGGCCTGGATGCGGGTGCCGATGATTACCTGATTAAACCTTTTGCTTTAGTCGA
ATTACAGGCGCGTGTTCGGGCACTGATCCGCCGATACCAAGGGCAAAGCGACAACCAGATTTCCGTGGGCAACCTGAAAA
TTAATCTTTCCTCGCAGCAGGCTTACCTCGACGGCACGCCGGTAGAAGTGACACCCAAAGAATTCGCTATTTTGTCACGG
CTGATGATGCGCGCAGGACAGACGGTGAATCGTGAATTGCTTCAGCAAGATCTCTATACCTGGCAGGATGATTTAGGCTC
CAACACCCTCGAAGTGCATGTCCATAATCTGCGCCGTAAACTTGGTAAAGAAGTCATCAGAACCGTGCGCGGTATCGGCT
ACAGGCTGGAAATTATCGTATGA

Protein sequence : 
MKLLIVEDDELLRQGLMLALTSENYACDCASTAAEAQSLIQASQYSLVILDLGLPDKDGATLLRQWRRQSISLPVLILTA
RDALEDRVDGLDAGADDYLIKPFALVELQARVRALIRRYQGQSDNQISVGNLKINLSSQQAYLDGTPVEVTPKEFAILSR
LMMRAGQTVNRELLQQDLYTWQDDLGSNTLEVHVHNLRRKLGKEVIRTVRGIGYRLEIIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-41 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_0501 YP_005198575.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 3e-64 67
Rahaq2_0501 YP_005198575.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002516.2.879194.p Protein 4e-35 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_0501 YP_005198575.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0473 Protein 9e-60 58