Gene Information

Name : Rahaq2_4503 (Rahaq2_4503)
Accession : YP_005202381.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4795100 - 4796509 bp
Length : 1410 bp
Strand : +
Note : PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I

DNA sequence :
ATGTCCGCTGAACACGTTTTGACGATGCTGAATGAGCATGAAGTGAAATTCGTAGATTTACGCTTCACTGATACCAAAGG
CAAAGAGCAGCACGTCACCATTCCTGCGCACCAGGTTAGCGCTGACTTCTTCGAAGAAGGCAAAATGTTTGATGGCTCTT
CAATCGGTGGCTGGAAAGGCATTAACGAATCTGACATGGTCCTGATGCCAGATGCGAGCACTGCTGTTCTTGACCCGTTC
TACGAAGAAACCACCCTGATCATTCGTTGCGACATCCTTGAGCCAACCACGCTGCAAGGTTATGACCGCGACCCACGTTC
TACCGCAAAACGTGCAGAAGATTTCCTGCGTTCTTCCGGTATCGCGGACACCGTGCTGTTCGGGCCAGAGCCAGAGTTCT
TCCTGTTTGATGATGTGCGCTTCGGCAGCAGCATCTCCGGTTCTCACGTCGCTATCGATGATATCGAAGGCGCATGGAAC
TCAAGCACCAAATACGAAGGCGGCAACAAAGGCCATCGTCCTGCAGTAAAAGGCGGTTACTTCCCGGTTCCTCCGGTCGA
CTCCTCCCAGGATCTGCGTTCAACCATGTGTCTGACCATGGAAGAAATGGGTCTGGTGGTTGAAGCTCATCACCACGAAG
TGGCAACCGCTGGCCAGAACGAAGTGGCAACCCGCTTCAACACCCTGACTAAAAAAGCTGACGAAATCCAAATTTACAAA
TACGTGGTTCACAACGTGGCTCACGCATTTGGCAAAACGGCGACCTTCATGCCAAAACCTATGTTTGGCGATAACGGTTC
AGGTATGCACTGCCACATGTCTCTGTCCAAGAACGGTAACAACCTGTTCGCTGGCGACAAATACGGCGGCCTGTCTGAAA
TGGCACTGTTCTACATCGGCGGTATCATTAAGCACGCTAAAGCGATCAACGCCTACGCAAACCCGACCACCAACTCCTAC
AAACGTTTGGTCCCGGGCTACGAAGCGCCAGTCATGCTGGCTTACTCTGCGCGTAACCGTTCTGCATCCATCCGTATTCC
TCACGTATCAACGCCTAAAGCGATGCGTATTGAAGCACGCTTCCCTGATCCAGCGGCTAACCCATACCTGGCGTTTGCGG
CACTGATGATGGCTGGCCTGGACGGTATCATCAACAAGATCCACCCTGGCGATGCGATGGACAAAAACCTGTATGACCTG
CCACCGGAAGAAGAAGCAGAAATTCCAAAAGTTGCAGGTTCACTGGAAGAAGCACTGAACGCACTGAACGAAGACCGCGA
GTTCCTGACCCGTGGTGGCGTGTTCACTGACGACGCTATCGATGCTTATATCGGTCTGCGTAAAGAAGAAATGGACCGCG
TGCGTATGACTCCGCATCCGGTTGAGTTCGAACTGTATTACAGCGTTTAA

Protein sequence :
MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVSADFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAVLDPF
YEETTLIIRCDILEPTTLQGYDRDPRSTAKRAEDFLRSSGIADTVLFGPEPEFFLFDDVRFGSSISGSHVAIDDIEGAWN
SSTKYEGGNKGHRPAVKGGYFPVPPVDSSQDLRSTMCLTMEEMGLVVEAHHHEVATAGQNEVATRFNTLTKKADEIQIYK
YVVHNVAHAFGKTATFMPKPMFGDNGSGMHCHMSLSKNGNNLFAGDKYGGLSEMALFYIGGIIKHAKAINAYANPTTNSY
KRLVPGYEAPVMLAYSARNRSASIRIPHVSTPKAMRIEARFPDPAANPYLAFAALMMAGLDGIINKIHPGDAMDKNLYDL
PPEEEAEIPKVAGSLEEALNALNEDREFLTRGGVFTDDAIDAYIGLRKEEMDRVRMTPHPVEFELYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-100 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_4503 YP_005202381.1 glutamine synthetase, type I VFG1399 Protein 3e-114 51