Gene Information

Name : Rahaq2_4493 (Rahaq2_4493)
Accession : YP_005202371.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4781300 - 4783381 bp
Length : 2082 bp
Strand : +
Note : PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG

DNA sequence :
ATGAAAGGCCGCCTGCTCGACGCCATCCCGCTGACGTCGCTTTCCGGCGTCGGAGCCAGTCAGGCAGATAAACTCACCAA
ACTCGGCCTTGAAACTATTCAGGATTTACTGCTTCATCTTCCTTTACGCTATGAAGATCGTACCCGCCTTTACACCATCA
ATGATTTGCAGCCCGGTATTTTCGCCACCATAGAAGGCGAAGTCCTGCGCAGCGATATCAGTTTTGGTCGCCGCAGAATG
CTGACCTGTCAGATAAGCGACGGTACCGGCATGGTGACATTACGCTTCTTCAACTTTAACGCCGCGATGAAAAACAGTCT
GGCCGCAGGCCGTCGTGTCACTGCTTATGGTGAAATCAAACGCGGCACAATCGGCGCAGAAATCATTCATCCGGAATACC
GCATTCAGGGTGAAAACAGCGAAGTGGTTTTGCAGGAATCGCTGACACCGGTTTACCCGACAACAGAAGGCATTCGTCAG
GCAACGCTGCGTAAACTGACCGATCAGGCACTTGAACTGCTCGACACCGTACCTATCGCCGAACTGTTGCCAGAGGAACT
GAGCCGGTCGCTGATCCCGCTTCCTCAGGCGCTGCATTTGCTACACCGTCCGCCGCCAGATATCCAGCTTGCAGACCTTG
AAAAAGGTCATCATCCGGCTCAGCGTCGCCTGATTATGGAAGAGTTGCTGGCACACAATCTTAGTATGCTGGCCGTCCGT
GCCGGTACACAAAGTTATAAAGCCCTGCCGTTGCATCATGATGATCGGTTGAAAAATCAGTTTCTCGCGTCCCTTCCTTT
CAGTCCGACCGGTGCACAACAGCGCGTGGTAGCTGAAATCGAGCAGGACTTAGCGAAAAGTTATCCGATGATGCGCCTGG
TTCAGGGCGACGTCGGTTCAGGTAAAACACTGGTGGCAGCCCTTGCCGCACTTTGCGCTATCGCACAGGGGCAGCAGGTC
GGATTAATGGCACCGACAGAATTGCTGGCCGAACAGCATGCGAATAATTTCCGTCAGTGGTTTGAACCGCTGGGCATTCA
GGTCGGCTGGCTGGCGGGTAAACAAAAGGGTAAAGCCCGGCAGGCGCAGCAGGATGCGATCGCCAGCGGACAGGTTTCGA
TGGTGGTGGGGACGCACGCTATCTTTCAGGAACAGGTTTTGTTCTCCTCACTGTCGCTGGTCATTATCGATGAACAACAC
CGTTTCGGTGTGCACCAGCGTCTGGCGTTGTGGGAAAAAGGTTTGCAACAGGGCTTCCACCCGCATCAGCTGATCATGAC
CGCCACGCCGATCCCACGCACACTGGCAATGACCGCTTACGCTGATCTCGATACCTCAGTGATCGACGAACTCCCGCCAG
GCCGCACGCCGGTGACCACTGTTGCCATTCCGGACACCCGTCGCAGCGACATTATCAGCCGCGTCAAAAGTGCCTGCGAG
CAGGAAAATCGTCAGGCTTATTGGGTTTGTACACTGATTGAAGAATCAGAAATGCTGGAGGCTCAGGCCGCTGAAGCCAC
ATGGGAAGGCCTGAAAGAGGCGCTTCCGGCGCTGAATATCGGGCTGGTTCATGGTCGCATGAAAGCCCAGGAAAAGCAGG
CCGTTATGCAGGCGTTCAAACAAGGGGAAGTGCAGCTTCTGGTGGCAACGACTGTCATTGAAGTCGGTGTTGACGTCCCG
AATGCCAGCCTGATGATTATCGAAAACCCGGAGCGTTTAGGGTTGGCGCAGTTGCATCAGTTACGCGGACGCGTTGGCCG
TGGCGCCGTTGCTTCTCACTGTGTGTTGCTCTACAAAACGCCGCTCAGCAAAACAGCGCAGAAACGTTTGCAGGTTTTAC
GCGACAGCAACGACGGCTTCGTTATTGCTCAGCAGGATTTAGAAATCCGCGGGCCGGGCGAGCTGCTGGGTACGCGCCAG
ACAGGCAGTGCCGAGTTTAAAGTCGCTGACTTATTACGTGATCAGGCGATGATCCCGGATGTACAGCGCATCGCCCGTTA
TCTGCAGCAACAATTCCCTGACCATGCCAAAGCCCTGATTGAGCGCTGGCTGCCAGAACGCGTCCGCTATACCAACGCCT
GA

Protein sequence :
MKGRLLDAIPLTSLSGVGASQADKLTKLGLETIQDLLLHLPLRYEDRTRLYTINDLQPGIFATIEGEVLRSDISFGRRRM
LTCQISDGTGMVTLRFFNFNAAMKNSLAAGRRVTAYGEIKRGTIGAEIIHPEYRIQGENSEVVLQESLTPVYPTTEGIRQ
ATLRKLTDQALELLDTVPIAELLPEELSRSLIPLPQALHLLHRPPPDIQLADLEKGHHPAQRRLIMEELLAHNLSMLAVR
AGTQSYKALPLHHDDRLKNQFLASLPFSPTGAQQRVVAEIEQDLAKSYPMMRLVQGDVGSGKTLVAALAALCAIAQGQQV
GLMAPTELLAEQHANNFRQWFEPLGIQVGWLAGKQKGKARQAQQDAIASGQVSMVVGTHAIFQEQVLFSSLSLVIIDEQH
RFGVHQRLALWEKGLQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRSDIISRVKSACE
QENRQAYWVCTLIEESEMLEAQAAEATWEGLKEALPALNIGLVHGRMKAQEKQAVMQAFKQGEVQLLVATTVIEVGVDVP
NASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQKRLQVLRDSNDGFVIAQQDLEIRGPGELLGTRQ
TGSAEFKVADLLRDQAMIPDVQRIARYLQQQFPDHAKALIERWLPERVRYTNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-98 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_4493 YP_005202371.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 60