Gene Information

Name : Rahaq2_4423 (Rahaq2_4423)
Accession : YP_005202302.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4712235 - 4713395 bp
Length : 1161 bp
Strand : -
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine (thiol)-lyase

DNA sequence : 
ATGACGCACAAGCAAGCCACCATTGCCGTGGGCAGTGGCCTGAACAATGATCAGCAATATGGTTGTGTAGTTCCGCCAAT
CTACCTTTCCAGCACCTACAACTTTGAAGATTTCAACCAGCCAAGAGCCCATGACTATTCACGTCGCGGCAATCCGTCAC
GTGATGTTGTCCAGCGTGCGCTGGCTGATCTGGAAGGTGGTGCCGGTGCGGTTCTGACCAGCAGCGGTATGTCAGCCATT
CATCTGGTGTGTACGGTCTTTCTGAAACCTGGCGATTTACTGGTTGCGCCGCACGACTGCTACGGCGGCAGCTACCGTTT
GTTCGACAGCCTGAGCAAGCGTGGCGCGTATCGAGTGCTGTTTGTGGATCAGGGTGATCCGCAGGCGCTGGCCGATGCGC
TGAAAGAGAAACCGAAGCTGGTGCTGATTGAAACCCCGAGCAATCCTTTGCTGCGTGTGGTGGATATACAGGCGATTTGC
GATGCGTCCCGCGCCGCCGGTGCCCTGACCGTGGTGGACAACACCTTCCTCAGCCCGGCGCTGCAGAACCCGTTGCAGCT
TGGTGCGGATTTAGTTGTCCATTCATGTACTAAATATCTGAACGGGCATTCTGATGTGGTCGCCGGTACGGTAATATCTA
AGACCGCAGAACATGCGACAGAGCTGGCATGGTGGGCAAACAACATTGGCGTGACCGCTGCAGCCTTTGACAGCTATCTG
TTATTGCGCGGTTTACGCACATTAACGGTCCGTGTGAAACAGCAACAGGAAAATGCTCTGGCGATTGTGGCTTATTTACA
GAAACAATCGCAGGTCAAAAAGCTGTATCATCCGTCGCTGCCGGAAAACCAGGGACATGAAATTGCCCGCCGTCAGCAAC
GTGGCTTCGGTGCCATGATCAGTTTTGAATTTAACGGAGATGAAGCTCAGTTGCGCCATTTCCTGAAAGAATTGAAGTTA
TTTACCCTCGCAGAATCACTGGGGGGCGTCGAAAGCCTGATTTCTCATACCGCGACCATGACGCACGCTGGCATGGCGCC
GGAAGCGCGCAAAGCCGCCGGGATTTCTGACAGCTTGCTCCGTATTTCTGTAGGTCTTGAAGACAGCGAAGATTTGATTG
CTGATCTGGAACACGCATTCCAGTCAGCGGCAACGAGGTAA

Protein sequence : 
MTHKQATIAVGSGLNNDQQYGCVVPPIYLSSTYNFEDFNQPRAHDYSRRGNPSRDVVQRALADLEGGAGAVLTSSGMSAI
HLVCTVFLKPGDLLVAPHDCYGGSYRLFDSLSKRGAYRVLFVDQGDPQALADALKEKPKLVLIETPSNPLLRVVDIQAIC
DASRAAGALTVVDNTFLSPALQNPLQLGADLVVHSCTKYLNGHSDVVAGTVISKTAEHATELAWWANNIGVTAAAFDSYL
LLRGLRTLTVRVKQQQENALAIVAYLQKQSQVKKLYHPSLPENQGHEIARRQQRGFGAMISFEFNGDEAQLRHFLKELKL
FTLAESLGGVESLISHTATMTHAGMAPEARKAAGISDSLLRISVGLEDSEDLIADLEHAFQSAATR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-58 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-59 42