Gene Information

Name : Rahaq2_4355 (Rahaq2_4355)
Accession : YP_005202247.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4638451 - 4639392 bp
Length : 942 bp
Strand : +
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence :
ATGGTAGACAAAATCATTCGAATTGCCACCCGCCAGAGCCCGCTGGCTTTGTGGCAGGCACAATATGTTCAAAGCCGGCT
GATGGCCTGTCACCCCGGTTTGCAGGTGGAACTGGTGCCCATGGTGACCAAGGGCGATATCATTTTAGATACCCCTCTGG
CGAAGGTTGGCGGCAAAGGTTTGTTCGTCAAAGAACTTGAACTGGCAATGCTTGATGGCCGTGCGGATATCGCCGTGCAT
TCCATGAAAGACGTGCCCGTGGAGTTCCCGGAGGGTCTGGGACTGGTCACTATTTGCGAACGCGAAGACCCGCGCGATGC
TTTCGTCTCTAATCAGTACACCCGTCTGACGGATTTGCCACACGGCAGTATTGTCGGGACATCAAGCCTGCGTCGTCAGT
GCCAGCTGCGTCAGAAACGTCCGGATCTGGTGATTCGTGATTTGCGCGGCAATGTGGGCACCCGCTTGTCCAAACTCGAT
AACGGTGAATACGATGCCATTATTCTGGCTGTCGCTGGCCTGAAACGTCTGGGTCTGGAAAACCGCATCACTTGTGCGCT
GACACCGGAAGAGTGTCTGCCCGCTGTAGGACAAGGTGCCGTCGGCATCGAATGCCGCCTTGATGATCAAACCACCCGCG
ACTTGCTGGCACCACTGGCGCACCGCGAAACCACAGTACGCGTGCAGGCTGAACGGGCAATGAATATGCGTCTTGAAGGG
GGATGTCAGGTACCCATCGGCAGCTATGCCGAGCTGGAAGGTGACGAACTCTGGCTTCGTGCGCTGGTCGGCGCACCGGA
CGGCAGCCAGATGGTATGCGGTGAACGACGCGGTCCGTCCGCTAACGCTCACCACATGGGTATCGACCTGGCAGAAGAAC
TGCTCGCCAACGGCGCGCGCGAAATTCTGCATGAGGTCTATCAGGGGAACGCGCCAAAATGA

Protein sequence :
MVDKIIRIATRQSPLALWQAQYVQSRLMACHPGLQVELVPMVTKGDIILDTPLAKVGGKGLFVKELELAMLDGRADIAVH
SMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYTRLTDLPHGSIVGTSSLRRQCQLRQKRPDLVIRDLRGNVGTRLSKLD
NGEYDAIILAVAGLKRLGLENRITCALTPEECLPAVGQGAVGIECRLDDQTTRDLLAPLAHRETTVRVQAERAMNMRLEG
GCQVPIGSYAELEGDELWLRALVGAPDGSQMVCGERRGPSANAHHMGIDLAEELLANGAREILHEVYQGNAPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-84 62
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-84 62