Gene Information

Name : Rahaq2_4248 (Rahaq2_4248)
Accession : YP_005202149.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : transcription termination/antitermination factor NusG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4523549 - 4524094 bp
Length : 546 bp
Strand : -
Note : PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG

DNA sequence : 
ATGTCTGAAGCACCTAAAAAACGTTGGTACGTCGTTCAGGCGTTTTCTGGCTTTGAAGGCCGCGTAGCGCAATCGCTGCG
TGAGCACATCAAATTACATGACATGGAAGAACTGTTTGGTGAAGTCATGGTTCCAACCGAAGAAGTGGTTGAGATTCGTG
GTGGGCTGCGCCGTAAAAGCGAACGTAAATTCTTCCCTGGTTATGTGCTGGTACAGATGGTGATGAATGACGCCAGCTGG
CACTTAGTTCGCAGCGTTCCTCGTGTTATGGGCTTCATTGGCGGAACGTCAGATCGTCCTGCTCCAATCAGCGATAAAGA
AGTTGATGCGATCATGAATCGCCTGCAACAAGTAGGTGATAAGCCACGTCCTAAAACGTTGTTCGAACCAGGTGAACTGG
TGCGTGTTAATGACGGCCCGTTTGCGGACTTCAATGGTGTGGTCGAAGAAGTTGATTACGAGAAAAGTCGCCTGAAAGTG
TCTGTTTCCATCTTTGGCCGTGCAACACCGGTTGAACTGGACTTCGGTCAGGTTGAAAAAGGTTAA

Protein sequence : 
MSEAPKKRWYVVQAFSGFEGRVAQSLREHIKLHDMEELFGEVMVPTEEVVEIRGGLRRKSERKFFPGYVLVQMVMNDASW
HLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGELVRVNDGPFADFNGVVEEVDYEKSRLKV
SVSIFGRATPVELDFGQVEKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 5e-56 59
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 5e-56 59