Gene Information

Name : Rahaq2_4104 (Rahaq2_4104)
Accession : YP_005202013.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4360914 - 4362374 bp
Length : 1461 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase

DNA sequence :
ATGTCTGCCCACCTTGAAAAACTTTCCGCCCATCATTTGTTCAGGACCGGCTATTTTGCCGGGGGTAAATGGCTCGAAGC
CAGAGAAACGTTTGATGTGCTGAATCCGGCCACCGGCGAGGTGGTGGCTAAAGTGGCAAAAGCCGGTAAAGCAGAAACGG
AAGCTGCCGTGAAGGCGGCCAGTGACGCGTTCCCTGAATGGCGCAAAACCACGGCAAAAGCGCGTTCTGAAATTCTGCAT
CGCTGGTATGAGCTGATGCTGGAAAACAAACAATTCCTCGGCGAACTGATGGTCGCCGAACAGGGCAAGCCGCTGAAAGA
GGCGCTGGGCGAAGTCGATTACGCCGCCAGTTACCTGCAATGGTTTAGCGAAGAAGCCAAACGCGCCAACGGCGAAATCA
TTCCTCCGGCCAAATCCGGCTCACGCATTCTGGCGACCCGCGAACCCGTCGGTGTGGTGGCGGCGATCACGCCGTGGAAT
TTCCCGCTGGCGATGCTGACCCGCAAACTTGGACCGGCGCTGGCGGCAGGTTGTACCGGCCTGATTAAACCGGCCAGTAA
CACGCCGCTGTCGGCGTTTGCCTTGTTGCAACTGGCGCAGGATGCGGGTGTGCCGGACGGCGTGATCAACGGCGTGGCCG
GTGACACCGGGGCTATCAGTGAAGTGATTATGGCGAGCGATGCGGTACGTAAAGTCTCCTTTACCGGCTCGACGGAAATC
GGCAAAACGCTGGTGCGTAACAGCGCCGACACCATGAAAAAAGTATCGATGGAACTCGGCGGCAATGCTCCGTACATCGT
GTTTGACGATGCCGACATTGAGGCTGCCGTGAAGGGCGCGATCACCTGTAAATTCCGTAATACCGGTCAGGTCTGTGTGT
GCATCAACCGCATTTATGTGCAGGACGGCGTGTACGAGGCGTTTACCTCGCGGCTGGTGGAAGAAGTGCGCAAGCTGAAA
GTCGGCAACGGCATGGACGAAGGCGTGATTGTCGGGCCGCTGATTGATATCAAAGGACTGGAGAAAGTCGAAGAGCACGT
CAAGGACGCGCTGGAGAAAGGCGGACGCCTGATGGAGGGCGGCCAGCGCCACAAACTTGGCGGCAACTTCTTCCAGCCGA
CGGTCATTATTGATGCCACTGATGACATGAAAGTCGCGCATGAAGAAACCTTCGGTCCGCTGGCGGCCTGTTTCCGTTTC
AAAACGGAAGAGGAAGTGATTAAACGCGCCAATGACACACCTTTCGGCCTGGCGGCGTATTTTTACAGCCAGAATTTGCA
ACGTATTTTCCGCGTTGCGGATGCTATTGAAAGCGGGATGATCGGCATTAACGAATGTGCGATTTCCAACGAAGCCGCGC
CGTTTGGCGGCGTAAAAGAATCCGGCCTGGGGCGCGAAGGTTCGGTGCTGGGGCTGGAAGAATATTTGCAGGTGAAAACA
CTGCATTTAGGGAATCTGTAA

Protein sequence :
MSAHLEKLSAHHLFRTGYFAGGKWLEARETFDVLNPATGEVVAKVAKAGKAETEAAVKAASDAFPEWRKTTAKARSEILH
RWYELMLENKQFLGELMVAEQGKPLKEALGEVDYAASYLQWFSEEAKRANGEIIPPAKSGSRILATREPVGVVAAITPWN
FPLAMLTRKLGPALAAGCTGLIKPASNTPLSAFALLQLAQDAGVPDGVINGVAGDTGAISEVIMASDAVRKVSFTGSTEI
GKTLVRNSADTMKKVSMELGGNAPYIVFDDADIEAAVKGAITCKFRNTGQVCVCINRIYVQDGVYEAFTSRLVEEVRKLK
VGNGMDEGVIVGPLIDIKGLEKVEEHVKDALEKGGRLMEGGQRHKLGGNFFQPTVIIDATDDMKVAHEETFGPLAACFRF
KTEEEVIKRANDTPFGLAAYFYSQNLQRIFRVADAIESGMIGINECAISNEAAPFGGVKESGLGREGSVLGLEEYLQVKT
LHLGNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 8e-129 58
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 3e-80 41