Gene Information

Name : Rahaq2_4003 (Rahaq2_4003)
Accession : YP_005201916.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4264500 - 4265507 bp
Length : 1008 bp
Strand : +
Note : PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase

DNA sequence :
ATGTCTGGCACATTGAAAAATCGTCATTTCCTTAAACTGCTCGACTTCACGCCGGAAGAAATTCAGCAACTGATCAAGCT
GGCGCGGGCACTGAAAAACGATAAGCAAACAGGTCAGGAACGTCCCTGTCTGCACGGAAAAAATATTGCGCTGATCTTTG
AGAAAACCTCCACCCGCACACGTTGTGCATTTGAGGTGGCCGCTTTCGATCAGGGGGCGCACGTCACCTACCTCGGCCCT
GGCGGCAGCCAGATCGGGCACAAAGAATCCATGAAAGACACCGCCCGCGTGCTGGGGCGAATGTACGACGGCATCGAATA
CCGGGGTTTTGCACAGAAGATTGTGGAGGAACTGGCGGAATTCTCCGGCGTACCGGTATGGAACGGGCTGACCGACGAGT
TTCATCCGACCCAGATCCTCGCCGACCTGATGACCATGCTTGAGCATTCGCCGGGGAAAAATCTCTGCCAGATCAGCTTC
GCTTATCTGGGTGATGCCCGAAACAATATGGGCAATTCCCTGATGGTCGGCGCAGCGAAAATGGGGATGGATATCCGTCT
GGTGGCGCCAAAATCCTTCTGGCCGGAAGAGGCCCTGGTCACTCTCTGCCGTGATATCGCCCGCACGACGGGGGCCCGCA
TTCTGCTCACGGAACACGTTGATGAGGGCGTAAAAGGCGTCGATTTCCTTTACACCGATGTCTGGGTGTCGATGGGCGAA
GCGAAAAGCGCCTGGGCAGAACGTATCAGCCTGATGAGCCCGTATCAGGTTAATGCTGCCGTCCTCCGCGCCACCGGCAA
TCCTGACGTCAAATTCATGCACTGCCTGCCCGCATTTCATAACGCAGAAACCACACTCGGCAAAGAACTGGAAATCACTT
ACGGCATGCAAGGGCTGGAAGTGACGGATGACGTTTTTGAGTCCGCGCATTCCATTGTGTTTGATGAAGCCGAAAACCGT
ATGCACACCATAAAAGCGGTCATGGTCGCCACGCTTGGCGATGACTAA

Protein sequence :
MSGTLKNRHFLKLLDFTPEEIQQLIKLARALKNDKQTGQERPCLHGKNIALIFEKTSTRTRCAFEVAAFDQGAHVTYLGP
GGSQIGHKESMKDTARVLGRMYDGIEYRGFAQKIVEELAEFSGVPVWNGLTDEFHPTQILADLMTMLEHSPGKNLCQISF
AYLGDARNNMGNSLMVGAAKMGMDIRLVAPKSFWPEEALVTLCRDIARTTGARILLTEHVDEGVKGVDFLYTDVWVSMGE
AKSAWAERISLMSPYQVNAAVLRATGNPDVKFMHCLPAFHNAETTLGKELEITYGMQGLEVTDDVFESAHSIVFDEAENR
MHTIKAVMVATLGDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-99 62
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-99 62
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-99 62
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-99 62
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-99 62
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-99 62
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 1e-99 61