Gene Information

Name : Rahaq2_3790 (Rahaq2_3790)
Accession : YP_005201712.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : P pilus assembly protein, chaperone PapD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4017433 - 4018146 bp
Length : 714 bp
Strand : -
Note : PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain

DNA sequence : 
ATGCGGCGTCTTCCTGTTATTTTATCCGGGATGTTATTTATTCTCTTTTCCGGAATGCCGGTTTATGCGGGGGTAATTAC
TGAGGCAACGCGGGTGATATATCAGGGCAATAAAAAAGAAGCCTCACTGACCGTCAGTAATCTGGGGAAACAGGCAGAAC
CTTTTCTGATCCAGTCCTGGGTTGATAATAACGGGCCTGACGGGCTGCAAAAATCTTCCGCTGCTGCGCCTTTTATTGTC
ACGCCACCTTTATTCCGCCTGAATGCCGGAGAAGATAACAGCCTGCGGATTATCCGCACCGGCGGCATATTACCCGACGA
TCGCGAATCCCTGTTCTGGCTGAATATCAAAGCCATTCCCCGCCTGCCTGAAGAAGCCCCTGCCGGTTTATTGCAAATCG
TGGTCAAGACCCGCCTCAAACTGTTTTATCGCCCCGTGGCGTTGCTCGCCCCCGCAGCGCAAAGCGCCTGGCGGCAACTG
CAGTTCTCCCGTCAGGGTTCAACGCTGCGGGTGACCAATCCGACACCTTATTACTTCACATTTTTCAGATTAAACCTTGG
CAGCAACCGTGTGGCGACAGGTAACACCATGGTTCCGCCCTTTGGGGAAGCCCGTTACCCCTGGCCGCAGGGCGCGACGG
GGAATGACGTCAGCTGGCAAGTGGTGAATGATTATGGTGGCGCCAGTTCAGTGGAAAAAAACCGGCTGCGCTGA

Protein sequence : 
MRRLPVILSGMLFILFSGMPVYAGVITEATRVIYQGNKKEASLTVSNLGKQAEPFLIQSWVDNNGPDGLQKSSAAAPFIV
TPPLFRLNAGEDNSLRIIRTGGILPDDRESLFWLNIKAIPRLPEEAPAGLLQIVVKTRLKLFYRPVALLAPAAQSAWRQL
QFSRQGSTLRVTNPTPYYFTFFRLNLGSNRVATGNTMVPPFGEARYPWPQGATGNDVSWQVVNDYGGASSVEKNRLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 6e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_3790 YP_005201712.1 P pilus assembly protein, chaperone PapD VFG0445 Protein 7e-37 42
Rahaq2_3790 YP_005201712.1 P pilus assembly protein, chaperone PapD VFG0875 Protein 4e-35 41