Gene Information

Name : Rahaq2_3755 (Rahaq2_3755)
Accession : YP_005201681.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3986570 - 3987256 bp
Length : 687 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCGAATTCTGTTAGTTGAAGATGACAAAATGATCGGTGACGGCATCAAAGCCGGGCTGGCGAAACTGGGTTTTACGCT
CGACTGGTTTACCGACGGGCTGACCGGCAAGGCCGCACTCGGCAGCGCGCCTTACGATGCTGTGATCCTCGATTTAAGCC
TGCCGGGCATGGACGGTATGCAGCTTTTGCGCGAGTGGCGAAAGGCTGGCAGGGATACACCGGTGCTTATCCTTACCGCG
CGTGATGCGCTGGAAGAGCGCGTCAGCGGATTGCAGGCCGGTGCCGATGACTATCTGTGTAAGCCGTTCGCGCTGGTGGA
AGTCGCCGCACGGTTGCAGGCGCTGATCCGCCGTCGCCACGGGGTGATAACGCCGAAAGTCACCCACGGTGCTGTGGAAT
TTGATCCCGCTGCCCGCAGTGTGACACTCAACGGAGAAACCGTGACGCTGACACCGCGTGAAGTCACCGTGCTGGAATTG
TTTCTCAACAACAAAGGCCGCGTGCTGGCGCGTACGCTTATTCAGGAAAAGCTCTACAACTGGGACGACGAGGTCAGCAG
CAACGCGGTGGAAGTGCATATTCACCATCTGCGCAGCAAACTCGGCAAAGGCTTTATTCGCACCGTTCATGGTGTGGGGT
ACACGCTCGGGGACGAGATAAAACCAGGCCAGGGAGGGGAAGGGTGA

Protein sequence : 
MRILLVEDDKMIGDGIKAGLAKLGFTLDWFTDGLTGKAALGSAPYDAVILDLSLPGMDGMQLLREWRKAGRDTPVLILTA
RDALEERVSGLQAGADDYLCKPFALVEVAARLQALIRRRHGVITPKVTHGAVEFDPAARSVTLNGETVTLTPREVTVLEL
FLNNKGRVLARTLIQEKLYNWDDEVSSNAVEVHIHHLRSKLGKGFIRTVHGVGYTLGDEIKPGQGGEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-41 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_3755 YP_005201681.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 1e-42 46
Rahaq2_3755 YP_005201681.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 5e-30 42
Rahaq2_3755 YP_005201681.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 7e-35 41
Rahaq2_3755 YP_005201681.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_3755 YP_005201681.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0473 Protein 2e-36 42