Gene Information

Name : Rahaq2_3739 (Rahaq2_3739)
Accession : YP_005201665.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophore ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3965040 - 3965852 bp
Length : 813 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGCCTGATAACAACGTACATCCGTCTTCATCGCTGCCAGAAAGCGTCTTTCGCCTGCTGGATGTGAGTTTCACCGTCCC
GGGACGCACGCTTCTCGCGCCATTATCGCTGAGCTTTCCGCAGGGAAAAGTGTGCGGCCTGATTGGTCACAATGGATCAG
GAAAGTCGACGTTATTAAAAATGCTCGGGCGGCATCAGTCTGCGACATCCGGAACGATTTACCTCAATGAAACGCCGCTG
GCGCAGTGGGACAGCAAAGCCTTTGCGCGTCAGGTGGCGTATCTGCCGCAGCAGCTTCCCGCCGCAGAAGGCATGACCGT
GCAGGAACTGGTGTCGATTGGCCGCTATCCGTGGCACGGCGCACTGGGTCGTTTTAAACATCAGGACAAAGAAAAGGTCG
AAGAAGCCATTGCGCTGGTCGGCCTCAAACCGTTTGCCCGCCGTCTGGTGGACAGCCTCTCCGGCGGCGAACGTCAGCGC
GCCTGGCTGGCAATGATGGTGGCGCAGGACAGCCGTTGCCTGCTGCTCGATGAGCCGACCTCTGCGCTGGATATCGCCCA
TCAGAAAGACGTGCTGGCCTTGATCCAGCGTCTGAGCCGTGAAAAAGGCTTAACGGTGATCGCTGTGCTGCATGATCTGA
ATATGGCCGCGCGCTATTGCGATCAGTTGATGGCGTTGCGCGGCGGTGAAGTGATTGCCCAGGGCACACCGGAAGAGATG
ATGCGCGGCGACGTGCTGGAACAAATTTATGGCATTCCGATGGGGATCCTCCCGCATCCTGCGGGTGGCGCACCGGTGAG
CTTCGTATACTGA

Protein sequence : 
MPDNNVHPSSSLPESVFRLLDVSFTVPGRTLLAPLSLSFPQGKVCGLIGHNGSGKSTLLKMLGRHQSATSGTIYLNETPL
AQWDSKAFARQVAYLPQQLPAAEGMTVQELVSIGRYPWHGALGRFKHQDKEKVEEAIALVGLKPFARRLVDSLSGGERQR
AWLAMMVAQDSRCLLLDEPTSALDIAHQKDVLALIQRLSREKGLTVIAVLHDLNMAARYCDQLMALRGGEVIAQGTPEEM
MRGDVLEQIYGIPMGILPHPAGGAPVSFVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-46 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-44 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-42 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-42 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-42 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-42 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_3739 YP_005201665.1 cobalamin/Fe3+-siderophore ABC transporter ATPase BAC0164 Protein 2e-46 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_3739 YP_005201665.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG1042 Protein 1e-46 46
Rahaq2_3739 YP_005201665.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG0925 Protein 3e-46 43