Gene Information

Name : Rahaq2_3689 (Rahaq2_3689)
Accession : YP_005201617.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : periplasmic protein involved in polysaccharide export
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3907932 - 3909065 bp
Length : 1134 bp
Strand : -
Note : PFAM: Polysaccharide biosynthesis/export protein; SLBB domain

DNA sequence :
ATGAAAAATAAAACGTTTAAGATTTCTGCATTATTCGGGGCTTTGTTACTGAGCGGATGTACGGTTATTCCAGGGCAGTC
GTTAAGTACAATGGACAAAGACGTTGTTCAACCTACTGATAGCAATTATGACATTGATAAATTAGTGAACGTTTACCCGA
TGACGCCAGGTCTGGTGGATCAACTGCGCCCTGACACTGTTCAGGCACGGCCAAACCCTGAGCTGGATATGCAACTGCAA
AACTACCAATACCGTATCGGTTCCGGTGATGTGCTGATGGTTACTGTGTGGGACCATCCTGAACTGACGACGCCGGCAGG
CCAGTACCGCAGCGCCAGCGATACGGGTAACTGGGTAAACACCGACGGCACGATATTTTACCCCTACATCGGTAAAGTCG
CCGTGGCCGGGAAAACGGTCTCTCAGGTTCGGGAGGAGATCAGTAATCGCCTGGCAAAATATATAGAAAGCCCGCAGGTA
GATGTCAGCGTCGCGTCATTCCGCTCGCAAAAAGTGTATGTCAGTGGCGAGGTCGTGAAATCGAGCCAGCAGCCGATTAC
CAATATCCCTCTTACTGTCATTGATGCCATCAATGCCGCGGGCGGACTTGCACCGGACGCAGACTGGCGCAATGTCGTAT
TAACCCATAACGGGCAGGATCGCCGCATCTCCCTGGAAGCGCTGATGCAGAAAGGGGATTTAACCCAAAACCAGTTGCTC
TATCCGGGTGATATTCTCTACGTACCGCGGAATGATGATCTGAAAGTATTCGTCATGGGGGAAGTCGGGAAACAGAGCAC
GCTCAAAATGGATCGCAGTGGCATGACGCTGGCAGAAGCCTTAGGGAATGCTGACGGGGTTTCGCAGGTGATGTCCGATG
CGTCCGGGATATTTGTTATCCGCCAGATTAAGGGGAATAAACAAGGAAAAATTGCCAATATCTATCAGCTGAATGCTAAA
GATGCTTCCGCAATGGTAATGAGTACCGAATTCCAATTGCAACCCTACGATATCGTTTATGTCACAGCCGCGCCGGTTGT
TCGCTGGAATCGTGTGATATCTCAAATCGTCCCGACCATCTCCGGTGTACATAATACGATCGAAGCGGTTCGTTATATCC
ATAACTGGAACTAA

Protein sequence :
MKNKTFKISALFGALLLSGCTVIPGQSLSTMDKDVVQPTDSNYDIDKLVNVYPMTPGLVDQLRPDTVQARPNPELDMQLQ
NYQYRIGSGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNTDGTIFYPYIGKVAVAGKTVSQVREEISNRLAKYIESPQV
DVSVASFRSQKVYVSGEVVKSSQQPITNIPLTVIDAINAAGGLAPDADWRNVVLTHNGQDRRISLEALMQKGDLTQNQLL
YPGDILYVPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNADGVSQVMSDASGIFVIRQIKGNKQGKIANIYQLNAK
DASAMVMSTEFQLQPYDIVYVTAAPVVRWNRVISQIVPTISGVHNTIEAVRYIHNWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 2e-133 69