|
Name : Rahaq2_3554 (Rahaq2_3554) Accession : YP_005201491.1 Strain : Rahnella aquatilis CIP 78.65 Genome accession: NC_016818 Putative virulence/resistance : Virulence Product : lysine/ornithine N-monooxygenase Function : - COG functional category : - COG ID : - EC number : - Position : 3764736 - 3766025 bp Length : 1290 bp Strand : + Note : PFAM: Pyridine nucleotide-disulphide oxidoreductase DNA sequence : ATGCCCGTGAAGGATTTGATTGGTATTGGTATCGGTCCCTTTAATCTCAGTCTCGCCGCCATGGCAAAAGACACGGAAAA ACTCAACGCTGCTTTCTTCGACGCTAACCCGGAATTCAGCTGGCATCCCGGTATGTTATTACCCACGGCGACCATGCAGA CCTACGTCCTGCAGGATCTGGTCACTACCGTTGCGCCGCGCAGCGAATTTTCGTTTATTAACTATCTGGTTGAGCAGAAG AAAATTTACCGTTTTCTGGCCACGGAACAGCTGATCATCAGCCGCGATGAGTTTTCCGATTATCTGCGCTGGGCGTGCGA CCGCATTACGGGTTTGCATTTTTCCGAGCCGGTTGAGCGGATTGATTTCGACGATAAGCGGCAGGAATTTATCGTGCAGA GTGAAAAAGGCGAGCACCGCGCACGCAATATTTGTCTCGGCACCGGTCATGCCCCGTGGATCCCTAAACCGGCACGGGCA GCACTGGGGGATAACTGTTTTCATGCCGCAGAAATAGAGCTGCGTGAGCCTGATTTCACCGGTAAACGGGTGGTAGTAGT CGGCGGCGGACAGAGCGGTGCCGATATCGTTCTTAACACACTGAGCGGCCACTGGGGCGAATTCACCGAACTGAGCTGGA TATCCCGGCGCCCTAATTTTCAGCCACTGGATGAATCGATTTTCACCAATGAATATTTCACGCCGGAGTATGTGAACTAC TTTTATACGCTGCCGGAAGAGGTGCGCGAGCAGGAAATCGAAACGCAAAAACTGCCTTCTGACGGCATCAGTTATCACAC CCTGGAAGACATCTATAAGCAGCTTTACCACCGTTTCGACGTGCTGCATCAGCCGCGTAATGTGCGTTTGCTGCCGCACC GGGCGCTGGATCATATCGTGCGTAATGCGGCTGGCGATTTCAGTTTGCAGGCAAAACACGGGCTGGAAAAATGCGAGGAA CATTTCAGTGCCGATATCGTGATCCTGGCGACCGGCTATCGCCCCGGTTTACCTGATTATCTTGAACCGCTGCTGGAACG CATCCCGTATGACCGCGAGCAACATTTGCCGCTGCAGCCGAATTTCAATCTGCGCTGGGATGGCCCGGAGCAGAACCGCA TTTACGCAGTGAATGCCGGGATCCACAGCCACGGCAGTGCCGAAGGGCAACTGACGCTGACCGCGTGGCGCTCAGCGAAA ATCCTTAATCATCTGCTGGGCGAAGCACATTACGATCTGCGGCCGGTGCCTTCGCTGGTCCAGTGGTGGTCAGATACGCC CCATAAATAG Protein sequence : MPVKDLIGIGIGPFNLSLAAMAKDTEKLNAAFFDANPEFSWHPGMLLPTATMQTYVLQDLVTTVAPRSEFSFINYLVEQK KIYRFLATEQLIISRDEFSDYLRWACDRITGLHFSEPVERIDFDDKRQEFIVQSEKGEHRARNICLGTGHAPWIPKPARA ALGDNCFHAAEIELREPDFTGKRVVVVGGGQSGADIVLNTLSGHWGEFTELSWISRRPNFQPLDESIFTNEYFTPEYVNY FYTLPEEVREQEIETQKLPSDGISYHTLEDIYKQLYHRFDVLHQPRNVRLLPHRALDHIVRNAAGDFSLQAKHGLEKCEE HFSADIVILATGYRPGLPDYLEPLLERIPYDREQHLPLQPNFNLRWDGPEQNRIYAVNAGIHSHGSAEGQLTLTAWRSAK ILNHLLGEAHYDLRPVPSLVQWWSDTPHK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iucD | NP_839220.1 | lysine:N6-hydroxylase | Virulence | SHI-2 | Protein | 2e-111 | 52 |
| iucD | NP_709457.1 | lysine:N6-hydroxylase | Virulence | SHI-2 | Protein | 2e-111 | 52 |
| iucD | YP_002414043.1 | L-lysine 6-monooxygenase | Virulence | Not named | Protein | 3e-112 | 52 |
| iucD | AAD44749.1 | IucD | Virulence | SHI-2 | Protein | 1e-111 | 52 |
| iucD | AAK71634.1 | IucD | Virulence | SHI-3 | Protein | 1e-111 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rahaq2_3554 | YP_005201491.1 | lysine/ornithine N-monooxygenase | VFG0618 | Protein | 8e-112 | 52 |
| Rahaq2_3554 | YP_005201491.1 | lysine/ornithine N-monooxygenase | VFG0937 | Protein | 1e-112 | 52 |
| Rahaq2_3554 | YP_005201491.1 | lysine/ornithine N-monooxygenase | VFG1084 | Protein | 8e-112 | 51 |
