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Name : Rahaq2_0354 (Rahaq2_0354) Accession : YP_005198440.1 Strain : Rahnella aquatilis CIP 78.65 Genome accession: NC_016818 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 380186 - 381712 bp Length : 1527 bp Strand : - Note : PFAM: Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E DNA sequence : ATGAACAGAGATAACGAGTTGCTGAATAGACCAGTTGTGGAACACGCCGCCCCTGTTCTGCCTTATACCTACGCTAAACA AAAAGGCGTAACGCTACTTGATAACGTGCTTTTTTGCCGCCAGGACATTTCAGTGGAAACATTGCTCGAAGCACGTCGGG TCATGGGGGAAATAATGGCGGTCGAAATAGTGGAAACGACACTGTTTGATGAAAAGTTATCAGCGACCTACCAGCGTAGC AGCGGCCAGTCACAACAAATTATTGATGATATCGATAACGAGGTCGACCTTCTGTCTTTATCTGAGGAATTACCTGATAA CGAAGACTTGCTGGCCAGTGATGAAAATTCGCCGATCATACGTCTGATTAATGCGGTGCTTTCTGAAGCAGTCAAAGAGG GTGCTTCGGATATTCATATCGAAACCTTCGAACGCACGCTCAGTATTCGGTTTCGTATTGACGGCGTCTTACGGCAAATC TTGCAACCGGCTCGCAAGCTGGCACCTTTTCTGGTATCGCGTATCAAGGTGATGGCAAAACTGGATATCGCTGAAAAACG TTTACCTCAGGATGGTCGCATTTCTTTACGTATCGGTCACCGGGCGATTGATATCCGCGTATCGACCATTCCGGCTCAAT ATGGTGAGCGCGTGGTGATGCGTCTCTTGGATAAAAATAATTTATGTCTTGATATTCCACAACTTGGCCTGTCTCCACAG GACGAACAACAGCTATCGGCATTAATCCATAAACCTCACGGGATCATTCTGGTCACCGGGCCGACCGGCTCAGGTAAAAG CACAACTCTGTACGCGGTTCTTTCTGCACTCAACAATAACGAGCGTAACATTCTTACCGTTGAAGACCCGATTGAGTATG AACTGGAAGGCGTGGGTCAAACGCAAGTTAACCCCCGCGTAGAAATGACATTTGCTCTCGGTTTGCGGGCAATTTTGCGT CAGGACCCGGATGTCGTCATGGTCGGTGAGATCCGTGACAATGAAACCGCTCAAATCGCGGTACAAGCTTCACTGACCGG CCATCTGGTGATGTCTACATTGCATACGAATAGCGCCGTCGGTGCTATTACCCGTTTACGGGATATGGGTCTGGAGCCCT TCCTTCTCGCCTCCTCATTATTAGGCGTGGTTGCTCAGCGACTTGTGCGACGCCTGTGCCCACATTGTAGCCAGCAGTCC CCGTTAGATGCGTCTCATATTCCTTTATTCCACTTTCTGCCTGAGCCCCCACCCTTTGTTTTTAAAGCCAGCGGATGTTC TCAATGCCATTTCACAGGCTACAAAGGCAGGGCTGCTATCCATGAATGTATGGTCGTTGATAACGCTATACGTCAGGCAA TTCATGAGAATCAGGATGAATTTTCCATTGAGAACATTCATCGCAAAACAGCCCGAAGCTTGCGGGAAAATGGCCTGCTT AAGGCCATTAGCGGCGAGACTACACTGGAAGAAGTCATCAGAGTCACGGCTGAACAAGAGATAGCGGCTGGGGGGACAAC CTCATGA Protein sequence : MNRDNELLNRPVVEHAAPVLPYTYAKQKGVTLLDNVLFCRQDISVETLLEARRVMGEIMAVEIVETTLFDEKLSATYQRS SGQSQQIIDDIDNEVDLLSLSEELPDNEDLLASDENSPIIRLINAVLSEAVKEGASDIHIETFERTLSIRFRIDGVLRQI LQPARKLAPFLVSRIKVMAKLDIAEKRLPQDGRISLRIGHRAIDIRVSTIPAQYGERVVMRLLDKNNLCLDIPQLGLSPQ DEQQLSALIHKPHGIILVTGPTGSGKSTTLYAVLSALNNNERNILTVEDPIEYELEGVGQTQVNPRVEMTFALGLRAILR QDPDVVMVGEIRDNETAQIAVQASLTGHLVMSTLHTNSAVGAITRLRDMGLEPFLLASSLLGVVAQRLVRRLCPHCSQQS PLDASHIPLFHFLPEPPPFVFKASGCSQCHFTGYKGRAAIHECMVVDNAIRQAIHENQDEFSIENIHRKTARSLRENGLL KAISGETTLEEVIRVTAEQEIAAGGTTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-133 | 57 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-133 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rahaq2_0354 | YP_005198440.1 | general secretory pathway protein E | VFG2048 | Protein | 6e-135 | 57 |
| Rahaq2_0354 | YP_005198440.1 | general secretory pathway protein E | VFG0182 | Protein | 8e-131 | 56 |
| Rahaq2_0354 | YP_005198440.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-118 | 51 |
| Rahaq2_0354 | YP_005198440.1 | general secretory pathway protein E | VFG0233 | Protein | 5e-82 | 46 |
| Rahaq2_0354 | YP_005198440.1 | general secretory pathway protein E | VFG2426 | Protein | 6e-71 | 44 |
| Rahaq2_0354 | YP_005198440.1 | general secretory pathway protein E | VFG0112 | Protein | 2e-84 | 44 |
| Rahaq2_0354 | YP_005198440.1 | general secretory pathway protein E | VFG1880 | Protein | 3e-76 | 42 |
