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Name : Rahaq2_0353 (Rahaq2_0353) Accession : YP_005198439.1 Strain : Rahnella aquatilis CIP 78.65 Genome accession: NC_016818 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 378972 - 380189 bp Length : 1218 bp Strand : - Note : PFAM: Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F DNA sequence : ATGAGCCGCTTCTCTTTTCATGCAATCTCCCCGACAGGCAAGGCGCAGCGGGGAGTGATTGACGCCGACTCTCTCCGGCT GGCCCGCCAGATGGTGCGTGAGCGGGGTTTAACCCTTCTTGAAATAAAGCAGGTTGGCAACTCGCTGACAGCTATAAATA ACAAAAATAAAGGATTGAAAACACGTGTACCTTCACATGCAGTTTCACTGTTCTCACGTCAGCTCGCCACATTAACTCAT GCAGCCCTGCCCGTCGAAGCAGCACTTGCCGTCATTGCCCGGCAAACCGAGCACGCCGGACTCACGCAAGTGCTGACCGC CGTTCGTAACAAAGTGGTGGAAGGGCATACGCTTGCCGATGCGTTATCTGATTTTCCGCGCATATTTGATCCGATGTTCA GAACACTGGTCACGGCAGGTGAACGAACCGGACAACTTGGCACCGTACTGGAGAAAATGGCGGATTATTATGAAATTCGC CAGCAGATCAAAAGCAAGTTGTCGCAAGCCATGATCTATCCGGCCATGCTCACCTTCGTTGCCATTCTGGTGATTGTTAT TTTACTGGTTGCCGTCGTCCCGCAAATCATTGAACAGTTTGTGCATATGAAACATACACTGCCTATCACCACCCGTATTT TAATCGGCGTCAGTGGTTTCCTGGGACGTGCATGGTGGCTGATTGCCATCGTGCTTATCGCTGTCATCGGTATCTTCAGG CTGGCTCTGCGTCGAAAACATAATCTCATGCGTTTTCATACGGCATTGCTTGGTGTTGCCGTTTTAGGACCGCTGATCAG GGCCATCAATAGTGCCCGATATGCCCGCACTCTCAGTATCTTGCAATCGAGCGGCGTTCCTTTACTTGATGCGATGAAAA TCTCGACAGAAGGCATAACGAACCTGCGGATCCATTATTTGCTGACTCAGGCGGCAGAACATGTTCGCCAGGGCAGTTCG CTCTTTGCCGTTCTGGAACAAACCCGTCTCTTTCCGCCCATGATGCTCTACATGATTGCTTCCGGTGAACAAAGCGGACG TCTTGGCGAACTCATGGCGCACGCGGCAGACAATCAGGACAAGTTGATGCAGCATCGGCTTTCAATGGTATTGGCGCTGT TTGAACCCCTGCTGATTGTCACTATGGCCAGTATCGTTTTGTTCATCATCATGTCGATTTTACAACCCATTCTCCAGCTT AATAACCTCGTCAGTTAA Protein sequence : MSRFSFHAISPTGKAQRGVIDADSLRLARQMVRERGLTLLEIKQVGNSLTAINNKNKGLKTRVPSHAVSLFSRQLATLTH AALPVEAALAVIARQTEHAGLTQVLTAVRNKVVEGHTLADALSDFPRIFDPMFRTLVTAGERTGQLGTVLEKMADYYEIR QQIKSKLSQAMIYPAMLTFVAILVIVILLVAVVPQIIEQFVHMKHTLPITTRILIGVSGFLGRAWWLIAIVLIAVIGIFR LALRRKHNLMRFHTALLGVAVLGPLIRAINSARYARTLSILQSSGVPLLDAMKISTEGITNLRIHYLLTQAAEHVRQGSS LFAVLEQTRLFPPMMLYMIASGEQSGRLGELMAHAADNQDKLMQHRLSMVLALFEPLLIVTMASIVLFIIMSILQPILQL NNLVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 9e-71 | 43 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-71 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rahaq2_0353 | YP_005198439.1 | general secretion pathway protein F | VFG2049 | Protein | 8e-69 | 43 |
| Rahaq2_0353 | YP_005198439.1 | general secretion pathway protein F | VFG0181 | Protein | 1e-71 | 42 |
