Gene Information

Name : Rahaq2_3339 (Rahaq2_3339)
Accession : YP_005201283.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3543768 - 3544742 bp
Length : 975 bp
Strand : +
Note : PFAM: Phage integrase family

DNA sequence :
ATGACAATCACTAAACTCGATAGTGGCAGCTACCAGGTAGACGTTCGACCAAAGGGCCGCGCCGGTAAGCGTATTCGCAA
GCGGTTTGATACAAAAGGTGAAGCGCAGCAGTATGAGCGTTGGGTGATCGCAACACAAAATAATAAAGATTGGCTGGATA
AGCCGACCGATCGCCGGACTCTCACCGAATTTATTGATCTTTGGTGGAAGTACAAAGGCCAGTCACTGAAAACGGGCGCA
CAAGCAAAGCTCCACCTCATGGCTATAGCTCGCGATGTTGGCAACCCGCCCGGCACGAAAATGACGAAGGGGATTTTTTC
AGATTACAGAGCAGAACAACTTAAGCGGGGATTAAAACCGGCAACCGTTAATAAGTATCAGAAGCTACTGAGTGGCGTTT
TCACAACGCTGATTAAAGCAGGCCAGTATAAAGATGTTAATCCTATGAAAGGAATTGATTTACTAAGTAAAAATCAATCT
GAAATGACATTTTTAACACAAGACCAGATCCAAATTTTTTTAAGCGCTTTGACAGGCGATAACCTAAAAACAGCCCGGTT
ATGTTTGGCTACCGGAGCGCGTTGGAATGAAGCTGCGACCCTTTCTCGTTCTGCGGTGATGAAGCATAAAGTGACTTTCA
TCAATACCAAGAACGGGCTAAACAGAACCGTGCCGATATCCTCATCACTCTACGATGAAATTATGGCAGGAGATGGCAAC
CGCCTGTTTCCTGACGTCCACTATTTAAACGTGAGGCGCGTACTCAAATCAGTGATACCTGACCTGCCAGACGGACAGGC
AACCCACGTTATGCGGCATACCTTCGCGAGTCATTTTATGATGAACGGCGGCAACATCCTGACCCTACAAAAAATATTAG
GCCATGCGTCAATTGTCCAGACGATGGCATATGCGCACTTTGCCCCAGATTATCTAAATGATGCGGTTCGATTAAACCCA
CTGGAAAATCAATAA

Protein sequence :
MTITKLDSGSYQVDVRPKGRAGKRIRKRFDTKGEAQQYERWVIATQNNKDWLDKPTDRRTLTEFIDLWWKYKGQSLKTGA
QAKLHLMAIARDVGNPPGTKMTKGIFSDYRAEQLKRGLKPATVNKYQKLLSGVFTTLIKAGQYKDVNPMKGIDLLSKNQS
EMTFLTQDQIQIFLSALTGDNLKTARLCLATGARWNEAATLSRSAVMKHKVTFINTKNGLNRTVPISSSLYDEIMAGDGN
RLFPDVHYLNVRRVLKSVIPDLPDGQATHVMRHTFASHFMMNGGNILTLQKILGHASIVQTMAYAHFAPDYLNDAVRLNP
LENQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4645 NP_458725.1 phage integrase Not tested SPI-7 Protein 6e-58 44
t4338 NP_807932.1 phage integrase Not tested SPI-7 Protein 6e-58 44