Gene Information

Name : Rahaq2_3326 (Rahaq2_3326)
Accession : YP_005201270.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : phage major capsid protein, P2 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3531881 - 3532927 bp
Length : 1047 bp
Strand : -
Note : PFAM: Phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family

DNA sequence :
ATGCGCAATACAACCCGCGATTTGTTTGATAAGTACATTCAGCGACAGGCTGAACTCAACCACATCAGCCCTGCCCACAT
CACCAAGGCGTACAGCATTGATCCGAGCGTTGAACAGACGCTTGAGGACAAGGTCCAGCAGTCGTCTGAGATGCTTAAGT
TAATCAATATTTACGGCGTCAACGATCAGAACGGTGAAAAAATTGGGTTGGGCGTAAGCGGCCCGATTTCCAGTACTAAC
AATTCCACCACCGATCGCCGTCAACCTACCAATCTGGCGGCGCTGGATTCGAATAAGTACACCTGTAACAAGGTGAACGC
CGATACCTTTACGCCGTATACGCAGCTTGATGCCTGGGCAAAATTCCAGGACTTTCAGAAGCGCCTTAGCAATCAGATCA
TCAAGCGCATTGCGCTCGATCGCATCATGATCGGCTTTAACGGTACCAGTTACGCGGAAAAATCAGACCGTGCCGCCAAT
CCATTGTTGCAGGATTGCGGTGTTGGCTGGCTCCAGCAGTACCGTACTAATGCAGCTCAGCGCGTGATGAAAGATGTCAC
TGTGACCAGTCGTGATGACACCAACCAGGTGGTTGCCAAAGGTGATTACGGTAACTATGACTCAATCGTTTTTGATGCGG
TCAATTCGCTTATGGATGAGTGGTACAAGGATTCGCCTGATCTGGTGGTGATCACCGGGCGTAATCTGACGGTTAACCGT
TCATTCCCAATCATCAACGCCGTAAGCACCAATAACCCGAACTCCGAAGCACTTGCCGGGCAGTTGATTGCGTCGCGTAA
AACGATCGGCAACCTGCCGTCATTCATTGCGCCGTTTTTCCCCGACGGCAGCATGTTTATTACCTCCTGGGAAAACCTGT
CCATTTACTGGCAGGAAGGTGGACACCGTCGCCGCATCGTTGAGGAGCCGGAATATAACCGCGTCTCAACGTACAGCTCT
TCTAATGATGCTTACGTCATTGAAGACTACGGCTATGGCTGTCTGATCGAAGGCATCACCGCCGCCGAACCAGACCCGGC
AGCATAA

Protein sequence :
MRNTTRDLFDKYIQRQAELNHISPAHITKAYSIDPSVEQTLEDKVQQSSEMLKLINIYGVNDQNGEKIGLGVSGPISSTN
NSTTDRRQPTNLAALDSNKYTCNKVNADTFTPYTQLDAWAKFQDFQKRLSNQIIKRIALDRIMIGFNGTSYAEKSDRAAN
PLLQDCGVGWLQQYRTNAAQRVMKDVTVTSRDDTNQVVAKGDYGNYDSIVFDAVNSLMDEWYKDSPDLVVITGRNLTVNR
SFPIINAVSTNNPNSEALAGQLIASRKTIGNLPSFIAPFFPDGSMFITSWENLSIYWQEGGHRRRIVEEPEYNRVSTYSS
SNDAYVIEDYGYGCLIEGITAAEPDPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 8e-78 49
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 3e-72 45
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 3e-72 45