Gene Information

Name : Rahaq2_3306 (Rahaq2_3306)
Accession : YP_005201250.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : phage tail sheath protein FI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3517770 - 3518966 bp
Length : 1197 bp
Strand : +
Note : PFAM: Phage tail sheath protein

DNA sequence :
ATGGCCACAAATTACCATCACGGTGTAACCGTCACGGAAACCACCGATCTAAGCACGATGATCACCGATATTGATTCGGC
GGTTATCGGTGTCGTTTGTATCGCTGACGATGCAGATGAAGACGCTTTCCCGCTGAATACCCCTGTACTCATTACCCGCG
TGGCTAACATGCTGGGCAAGGCGGGCAAAACCGGCACCCTGTTCACCACCCTGAAAGCCATTTCAGACCAGGCCAGCCCG
CAGACCATTGTCATCCGCGTGGCTGATGCGTCAAAAATCGTACCCCCGGAAGGCGGCACGGCACCGACACAGGATCAACT
GGTTATTGGCGGTACTGACCCGGACACCGGACTTTTCACTGGTATGTATGCGCTGCTATCAGCGGAGATGCGTGTTGGCG
TCCGCCCGCGCGTGCTTGCCGTTCCCGGCCTTGATACTCAGCCAGTGGCGGCGCAACTCGGCGTGATGGCTGAGAAGCTG
CGCGCCTTTGCTTACGTGTCCGCAAATGGCTGTAACACCATCGCAGAGGCGAAGACGTACCGCGAGAATTTTGCCCAGCG
TGAAATGATGGTGATCTGGCCTAACTTCATTTGCTACGACACCAACGCAGGGGTAAACGCCACCGTGCCGGTGGGTGCTC
ATGCGGTAGGGATGCGCGCCAAAATCGACGCAACGCAGGGCTGGCACAAAACTATTTCTAACGTGCCGGTAAATAACGTG
CTGGGAATGGATCGCGATATCTATTTCACATTACAGGGCACCGACACCGACGCGGACGAGCTGAACGCGGCAGGCGTCAC
CACCCTGATCAAACAGGGCGGCTATCGCATCTGGGGATCGCGTACCTGCGACGAAGAAACCTACATCTTTGAGAGCTACA
CCCGTACCGCTCAGATTGTGGCGGACACCGTGGCAGAAGCGCACTTCTCTTACGTTGATAAACCGCTCACCCCGTCGCTG
GTGAAAGATATCGTTGACGGTATCAACCGCAAGCTGACGTCCTATGTGACCGCTGGCAAGCTGCTGGGCGCGCGTTGCTG
GTATGACCCTGAACCAAATACCAGCGAAACGCTGCGCAACGGGCAGCTCACCATCAAATATAACTACACGCCTGTGCCAC
CGCTGGAAAATCTCAGCCTGGTGCAGGAGTTCACTGATGAATATTTCGCTACGTTTTCCAGCGCAGTGAATAACTAA

Protein sequence :
MATNYHHGVTVTETTDLSTMITDIDSAVIGVVCIADDADEDAFPLNTPVLITRVANMLGKAGKTGTLFTTLKAISDQASP
QTIVIRVADASKIVPPEGGTAPTQDQLVIGGTDPDTGLFTGMYALLSAEMRVGVRPRVLAVPGLDTQPVAAQLGVMAEKL
RAFAYVSANGCNTIAEAKTYRENFAQREMMVIWPNFICYDTNAGVNATVPVGAHAVGMRAKIDATQGWHKTISNVPVNNV
LGMDRDIYFTLQGTDTDADELNAAGVTTLIKQGGYRIWGSRTCDEETYIFESYTRTAQIVADTVAEAHFSYVDKPLTPSL
VKDIVDGINRKLTSYVTAGKLLGARCWYDPEPNTSETLRNGQLTIKYNYTPVPPLENLSLVQEFTDEYFATFSSAVNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13484.1 putative tail sheath protein Not tested PAGI-6 Protein 6e-96 53
STY4607 NP_458690.1 probable major tail sheath protein Not tested SPI-7 Protein 8e-94 52
t4301 NP_807898.1 major tail sheath protein Not tested SPI-7 Protein 8e-94 52