Gene Information

Name : Rahaq2_3198 (Rahaq2_3198)
Accession : YP_005201153.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3412915 - 3414981 bp
Length : 2067 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit

DNA sequence :
ATGAGTCGTAAACAACGTGCGTTATTTGAACCCCGTCTGATCCGCACTGCCCTGCTGGATTCGGTGAAAAAGCTGGATCC
CCGCGTTCAGTGGCGCAATCCGGTGATGTTCGTGGTGTATCTGGGCAGCATTCTGACCACGCTTATCTGGCTGGCAATCC
TGATGCACCGCACCGACGGCAGCGCGGCTTTTACCGGCAGCGTGTCGCTGTGGCTGTGGTTTACCGTACTGTTTGCCAAC
TTTGCCGAAGCACTGGCGGAAGGCCGCAGCAAGGCACAGGCGCAGAGTCTTAAAGGCGTGCAGAAAACCAGTTGGGCGAA
AAAAATCTACGAACCGCGCCCTGAATCGCCGGTGATTAAAGTCGCTGCCGATACCCTGCGTAAAGGCGATTACGTGCTGA
TCGAAGCGGGTGATACCGTGCCGTGCGACGGTGAAGTGCTGATCGGCGGTGCGTCAGTGGATGAAAGTGCCATTACCGGT
GAGTCTGCGCCCGTGATCCGCGAGTCCGGCGGCGACTTCTCCTCGGTCACCGGCGGCACACGCGTCTTGTCAGACTGGCT
GGTGGTCGAGTGTTCAGCCAACCCCGGCGATACCTTCCTTGACCGTATGATTGCGATGGTCGAAGGCGCAAAACGCCGCA
AGACGCCAAACGAAGTGGCGCTGACCATTTTGCTGGTCGCGCTGACGCTGGTGTTCGTGCTGGCCACCGCCACGCTCTAT
CCGTTCTCACTGTTCAGCGTTGACGCCAGTCATGCGGGCATCCCGGTCACAGTGACCGTACTGGTCGCGCTGCTGGTGTG
TCTGATCCCGACAACCATTGGCGGGTTGCTGTCGGCTATCGGCGTGGCGGGCATGAGCCGCATGCTGGAAGCTAACGTCA
TCGCGACCAGTGGCCGTGCGGTGGAAGCCGCCGGTGACGTGGATGTGCTGTTGCTGGATAAAACCGGCACCATCACGCTG
GGTAACCGTCAGGCATCGCAGTTCCTGCCCGCGCCGCAGGTGACGGAACAGGAACTGGCCGATGCCGCGCAGTTATCGTC
CCTGGCCGATGAAACGCCGGAAGGCCGCAGTATCGTGGTGCTGGCCAAGCAGCGCTTTAACCTGCGCGAACGCGACATTC
ATTCGCTGAATGCGACCTTTGTGCCCTTCTCCGCACAAACCCGCATGAGCGGCGTTAATGTCGGTGAGCGCAGTATCCGT
AAAGGGGCCGTCGATGCCATCCGCCGTCATGTGGAATCCAACGGCGGGACCTTCCCGAAAGCTGTCGATGGCCTGGTGGA
AACCGTGGCGCGTAAAGGCGGTACGCCGCTGGTGGTCGCCGAAGGCGCGAAAGTGCTGGGCGTAGTGGAACTGAAAGATA
TCGTCAAAGGCGGCATTAAGGAACGCTTTGCCGAGCTGCGCAAAATGGGCATCAAAACGGTGATGATCACCGGCGATAAC
CGCCTGACGGCTGCCGCCATTGCCGCCGAAGCGGGGGTCGATGATTTTCTGGCAGAAGCCACGCCGGAAGCCAAACTGGC
ATTGATTCGTCAGTATCAGTCAGAAGGCCGTTTAGTGGCGATGACCGGCGACGGCACCAACGATGCACCCGCGCTGGCGC
AGGCTGATGTCGCAGTGGCGATGAACTCGGGGACGCAGGCCGCGAAGGAAGCCGGGAACATGGTCGATCTCGATTCCAAT
CCGACCAAGCTGATTGAAGTGGTGCATATCGGTAAACAGATGCTGATGACGCGCGGCTCGCTGACCACCTTCAGTATCGC
TAACGACGTGGCGAAGTATTTCGCCATTATTCCGGCGGCGTTCGCAGCGACCTATCCGCAACTGAATGCGCTGAACGTCA
TGCATCTGCATTCTCCGGCTTCGGCCATTATGTCGGCGGTCATTTTCAACGCGCTGGTAATTGTGTTCCTGATCCCGCTG
GCGCTGAAAGGGGTGAGCTATAAAGCCATGAGTGCCGCTGCGCTGCTGCGTCGTAACCTGTGGATTTATGGTGCAGGTGG
TCTGCTGGTGCCGTTCGCCGGTATCAAGCTGATCGACGTGATCCTGACCGTTTTACATCTGAGCTGA

Protein sequence :
MSRKQRALFEPRLIRTALLDSVKKLDPRVQWRNPVMFVVYLGSILTTLIWLAILMHRTDGSAAFTGSVSLWLWFTVLFAN
FAEALAEGRSKAQAQSLKGVQKTSWAKKIYEPRPESPVIKVAADTLRKGDYVLIEAGDTVPCDGEVLIGGASVDESAITG
ESAPVIRESGGDFSSVTGGTRVLSDWLVVECSANPGDTFLDRMIAMVEGAKRRKTPNEVALTILLVALTLVFVLATATLY
PFSLFSVDASHAGIPVTVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLEANVIATSGRAVEAAGDVDVLLLDKTGTITL
GNRQASQFLPAPQVTEQELADAAQLSSLADETPEGRSIVVLAKQRFNLRERDIHSLNATFVPFSAQTRMSGVNVGERSIR
KGAVDAIRRHVESNGGTFPKAVDGLVETVARKGGTPLVVAEGAKVLGVVELKDIVKGGIKERFAELRKMGIKTVMITGDN
RLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQSEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSN
PTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNVMHLHSPASAIMSAVIFNALVIVFLIPL
ALKGVSYKAMSAAALLRRNLWIYGAGGLLVPFAGIKLIDVILTVLHLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 5e-162 63
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 4e-162 63
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 56
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 8e-142 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 1e-140 56
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 56