Gene Information

Name : Rahaq2_3197 (Rahaq2_3197)
Accession : YP_005201152.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase, KdpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3411183 - 3412871 bp
Length : 1689 bp
Strand : +
Note : PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA

DNA sequence :
ATGGCCGCAACCGGATTCTTACTGATTGCCAGTTTTATGCTGGTGCTTTTGCTGCTGGCAAAACCACTGGGTAACTTTAT
TGCTCAACTGATTGAAGGACAGCCCGGCGCATTTATTCAGCGCATAGAAAACGGTGTTTTACGCACGTCTGGCAGCAGCA
ATGCTGAAATGAACTGGTGGCAGTACGCGCTGGCGATCATGGTATTTAACATCCTGGGCATTGTCGTGCTGATGGCGTTG
CTGATGGCTCAAGGCGCATTGCCGATGAACCCGCAGCATTTCGGCGGGTTGTCATGGGATCTGGCTTTTAACACTGCGGT
AAGTTTCGTGACCAACACTAACTGGCAGGCTTACAGCGGCGAAAGCACGCTGAGCTATCTCAGCCAGATGGTCGGGCTCA
CCGTGCAAAACTTCCTCTCCGCAGCGACGGGTATCGCCGTAGCGTTTGCCCTGATCCGCGCTTTTGCGCGCCCTTCAGCT
CAAACCATTGGCAATGCCTGGACGGATTTATGGCGCATCACGCTGTATCTGTTGCTGCCAGTGGCTTTCCTGCTGGCACT
GTTTTTCGTCAGTCAGGGTGTGCTGCAAAACTTCGAAGCGTATCAGCACATCACCACGCTGGAAGGCCTGCAACAGACTT
TACCTATGGGACCAGTGGCTTCTCAGGAAGCGATCAAAATGCTCGGCACCAACGGCGGCGGCTTCTTCGGTGCCAACTCA
GCCCATCCGTTTGAGAACCCGACAGCCCTGACCAATATGGTGCAGATGCTGGCGATCTTCATTATCCCTTGCGCGCTGTG
TTTCGCATTTGGCCGTGTGGTCGGTGACAACCGTCAGGGCCACGCACTGGTCTGGGCGATGTCAGTGATCTTCGTGGTGT
CGGTGGTGGTGGTGATGTACGCCGAACTCAAAGGCAATCCGCATCTGATGGCTCTTGGTGCCAGCAGCAATTTTAATATG
GAAGGTAAGGAAAGCCGCTTCGGCATTCTGGCCTCCAGCCTGTACGCCGTTGTCACCACGGCAGCCTCATGCGGTGCAGT
CAATGCCATGCACGATTCCTTTACGGCACTCGGCGGCATGGTGCCGATGTGGCTGATGCAGATTGGTGAAGTGGTGTTCG
GCGGCGTGGGTTCCGGCCTGTACGGCATGCTGCTGTTCGTGCTGCTGACGGTGTTTATCGCCGGGCTGATGATTGGCCGC
ACACCGGAATATCTCGGTAAGAAAATCGATGTTTACGACATGAAGATGACCGCACTGGCCATCCTGGTGACACCGACGCT
GGTGCTGCTCGGCACAGCGCTGGCGCTGGTCACCGACGCCGGTCGCGCAGGGATTTTAAACCCCGGCGCGCACGGTTTCA
GTGAAGTGCTGTATGCCGTGTCTTCCGCCGCCAATAACAACGGCAGTGCGTTTGCCGGGCTGAGCGTTAATACACCGTTC
TACAACCTGTTGCTGGCAGTCTGCATGTTCTTCGGCCGCTTCGGCGTCATCATTCCGGTGCTGGCGATTGCCGGTTCGCT
GGTGATGAAAAAACGCCAGCAGGCAGGCAACGGCACCTTACCGACATCCGGCCCGCTGTTTATCGGTCTGCTGGTCGGCA
CCGTGTTGTTAGTCGGCGCACTGACCTTTATTCCGGCGCTGGCGCTGGGGCCGGTGGCGGAACATTTGCAGGTCTGGTCA
GCACAGTAA

Protein sequence :
MAATGFLLIASFMLVLLLLAKPLGNFIAQLIEGQPGAFIQRIENGVLRTSGSSNAEMNWWQYALAIMVFNILGIVVLMAL
LMAQGALPMNPQHFGGLSWDLAFNTAVSFVTNTNWQAYSGESTLSYLSQMVGLTVQNFLSAATGIAVAFALIRAFARPSA
QTIGNAWTDLWRITLYLLLPVAFLLALFFVSQGVLQNFEAYQHITTLEGLQQTLPMGPVASQEAIKMLGTNGGGFFGANS
AHPFENPTALTNMVQMLAIFIIPCALCFAFGRVVGDNRQGHALVWAMSVIFVVSVVVVMYAELKGNPHLMALGASSNFNM
EGKESRFGILASSLYAVVTTAASCGAVNAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMLLFVLLTVFIAGLMIGR
TPEYLGKKIDVYDMKMTALAILVTPTLVLLGTALALVTDAGRAGILNPGAHGFSEVLYAVSSAANNNGSAFAGLSVNTPF
YNLLLAVCMFFGRFGVIIPVLAIAGSLVMKKRQQAGNGTLPTSGPLFIGLLVGTVLLVGALTFIPALALGPVAEHLQVWS
AQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 4e-79 49
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 5e-79 49
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 1e-57 43
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-57 43
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-57 43
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-57 43
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-57 43
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 4e-59 43