Gene Information

Name : Rahaq2_3062 (Rahaq2_3062)
Accession : YP_005201022.1
Strain : Rahnella aquatilis CIP 78.65
Genome accession: NC_016818
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3285989 - 3286849 bp
Length : 861 bp
Strand : +
Note : PFAM: MerR family regulatory protein

DNA sequence : 
ATGTCTCTGTACAGCATCGGTGAAGTCGCCCGAATTTGTGGTATCAACCCGGTCACGTTGCGTGCCTGGCAGCGGCGTTA
TGGCCTGCTGAAGCCACAGCGCACAGAGGGTGGCCATCGTCTGTTTAATGATGATGATCTCGATACCATCCGCACCATTC
TGGGCTGGATCAATCGCGGTATTCCGGTTGGTCAGGTGAAATCTTTGCTGGAAGGTAAAGTGGACGCGCTACCCGGTGGC
TGGTCGCAGTCAGAACATCAGTTGCTGACTGCCTTACAGGATGGTCGTCCGCAAAAAGTTCGTCAGCTGATGATGGAATT
CGGTCGAGAATATCCGGCGGCCACATTTGTGAAGAACGTGCTTCGCCCGCTGCGTGAACGCCTGAGTTCCGGCGATGCGC
GACTGCTGATGTTACGCAGCCAGCTTGACGGGCTGATCATTGAACACGCAGTGATGTGTATGAACGCTGCCCGTAAACGC
CCCGGAGCGGTTGCCACACTGATCGGCTGGGGACATACAGACAGCACCGAATTGTGGCTTGAAGCCATCGTGCGCTGCGA
AGAAGGTTTTCAGATCGAGATATTACCGGTTCCGCTCAGCGAACCGTATCTGGAAAACCTGAGCGGTTCGCAAATTCTGT
TGTGGTCCGAAGGCAAGCTGACGCAGGTCCAGCGCCAGCGCCTGCAGAACTGGATGGATCAGGGGTTGTCGATCATGCTG
CTGGGCAGTTCTGCGGTTCTGCTTGGCGCAGAAGAAACAGACGCAGAGGAAGGCGGGTTCAGCGAACGTCTCCGGGGCGG
TGATCCTCATGCCAGTCTTCATACCGGGCCAGTTCGCCAGAAAGGAAAAAATAATGACTAA

Protein sequence : 
MSLYSIGEVARICGINPVTLRAWQRRYGLLKPQRTEGGHRLFNDDDLDTIRTILGWINRGIPVGQVKSLLEGKVDALPGG
WSQSEHQLLTALQDGRPQKVRQLMMEFGREYPAATFVKNVLRPLRERLSSGDARLLMLRSQLDGLIIEHAVMCMNAARKR
PGAVATLIGWGHTDSTELWLEAIVRCEEGFQIEILPVPLSEPYLENLSGSQILLWSEGKLTQVQRQRLQNWMDQGLSIML
LGSSAVLLGAEETDAEEGGFSERLRGGDPHASLHTGPVRQKGKNND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 4e-49 45
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 4e-49 45
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 3e-49 45
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 1e-48 45
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 4e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq2_3062 YP_005201022.1 putative transcriptional regulator VFG0491 Protein 2e-49 45